Senior Biomedical Imaging Engineer: Nextflow Pipeline Lead

Axle; United States; On-site; USD 120,000 - 210,000; Full time

Benefits offered by this job

Educational Benefits for Career Growth

Paid Time Off (Including Holidays)

Employee Referral Bonus

401K Matching

100% Medical, Dental & Vision Coverage

Job summary

A leading biomedical imaging firm in the United States is looking for a Senior Biomedical Imaging Engineer to refactor complex imaging assays into optimized Nextflow processes. You will leverage your expertise in imaging and cloud platforms to develop modular pipelines that enhance scientific workflows. The ideal candidate will have advanced mastery of Nextflow, a deep understanding of imaging analysis algorithms, and experience in cloud-based data orchestration. This role offers competitive compensation and a focus on innovation in biomedical research.

Qualifications

• Advanced mastery of Nextflow in production environments.
• Deep knowledge of imaging domain and QC metrics.
• Experience with Linux/Unix and HPC environments.

Responsibilities

• Refactor imaging assays into Nextflow pipelines.
• Lead the development of headless imaging integrations.
• Collaborate on data management between on-premises and cloud.

Skills

Nextflow Mastery

Image Analysis Algorithms

Data Orchestration in GCP

Containerization with Docker

Linux/Unix Fluency

Education

Professional or Academic Background in Bioimage Informatics

Tools

Docker

Google Cloud Platform

PostgreSQL

Job description

A leading biomedical imaging firm in the United States is looking for a Senior Biomedical Imaging Engineer to refactor complex imaging assays into optimized Nextflow processes. You will leverage your expertise in imaging and cloud platforms to develop modular pipelines that enhance scientific workflows. The ideal candidate will have advanced mastery of Nextflow, a deep understanding of imaging analysis algorithms, and experience in cloud-based data orchestration. This role offers competitive compensation and a focus on innovation in biomedical research.