Bioinformatics Analyst

Brown University Health; Providence (RI); On-site; USD 68,000 - 112,000; Full time

Job summary

Brown University Health in Providence, RI, is seeking a Bioinformatics Analyst to analyze clinical Next Generation Sequencing data, help develop data analysis pipelines, and organize databases within the Department of Pathology.

The role emphasizes collaboration with pathologists and laboratory staff, applying genomics expertise and coding skills in a fast-paced clinical setting. A bachelor’s degree is required, with a master’s preferred; two years of relevant experience is desirable.

Qualifications

• Bachelor’s degree required; master’s preferred in bioinformatics or related field.
• Strong genomics knowledge and data analysis skills.
• Proficiency in programming/scripting (Python, Perl, Java).
• Experience with DNA-seq and RNA-seq data analysis tools.
• Familiarity with SQL, HTML/CSS, and webtool development.
• Capable of working in CAP/CLIA lab settings is a plus.

Responsibilities

• Analyze clinical NGS data and validate new tests.
• Develop and maintain analysis pipelines and databases.
• Collaborate with pathologists and lab staff on data interpretation.
• Evaluate innovative analysis methods and software tools.
• Assist in building web tools and related resources.
• Contribute to documentation and validation summaries.

Skills

Python

Perl

Java

Genomics understanding

Teamwork

Time management

Education

Bachelor’s Degree

Master’s Degree in Bioinformatics/Computational Biology/Computer Science

Tools

BWA

GATK

STAR

Samtools

SQL

HTML

CSS

Apache

Job description

SUMMARY

Under the general supervision of the Bioinformatics Scientist, Department Manager, Laboratory Directors, and Pathologists, and in accordance with established policies and procedures, the Bioinformatics Analyst performs independently in the Department of Pathology. The Bioinformatics Analyst will be responsible for analyzing clinical Next Generation Sequencing data, contributing to the development of data analysis pipelines, and organizing and maintaining databases.

Brown University Health employees are expected to successfully role model the organization's values of Compassion, Accountability, Respect, and Excellence as these values guide our everyday actions with patients, customers and one another.

RESPONSIBILITIES

• Participates in the daily clinical bioinformatics workflow, such as DNA-seq and RNA-seq data analysis.
• Analyzes the clinical data for the validation of new Next Generation Sequencing tests.
• Assists with preparation of validation summaries of the new Next Generation Sequencing tests.
• Assists in developing analysis pipelines for Next Generation Sequencing tests.
• Evaluates analytical aspects of emerging analysis methods.
• Assists in the development of databases and webtools.

MINIMUM QUALIFICATIONS

• Bachelor’s Degree required.
• Master’s Degree in Bioinformatics, Computational Biology, Computer Science or a related field is preferred.
• Demonstrates strong scientific understanding of genomics.
• Demonstrates proficiency in programming and scripting skills (e.g, Perl, Python, or Java).
• Demonstrates knowledge of DNA-seq and RNA-seq data analysis tools (e.g., BWA, GATK, STAR, Samtools).
• Demonstrates knowledge of database and webtool development (e.g., SQL, HTML, CSS, Apache).
• Maintains up-to-date knowledge of bioinformatics data analysis tools
• Familiarity with CAP/CLIA lab setting is preferred but not required.

EXPERIENCE

• At least two years of industry or clinical lab experience. Experience in developing computational approaches for cancer genome and/or germline analysis is highly desirable.
• Excellent teamwork, time management, and organizational skills.

WORK ENVIRONMENT AND PHYSICAL REQUIREMENTS

• This position requires the Bioinformatics Analyst to work closely with Bioinformatics Scientists, Medical Technologists, Management, Laboratory Directors and Pathologists.
• Ability to operate equipment and instruments and to perform all procedures within assigned laboratory section and interpret them for accuracy.
• Physical and visual dexterity necessary to conduct and interpret analysis.
• Visual strain is encountered while closely examining data.

INDEPENDENT ACTION

• Ability to work independently in a fast-paced, multidisciplinary environment.
• Ability to multi-task and work on multiple clinical and developmental projects simultaneously.
• Analyst functions independently within the department’s policies and procedures. Refers specific complex issues to the Bioinformatics Scientist, Manager, Laboratory Directors, or Pathologists when clarification of policies and procedures is required.

SUPERVISORY RESPONSIBILITY

None.

Pay Range

$67,724.80-$111,716.80

EEO Statement

Brown University Health is committed to providing equal employment opportunities and maintaining a work environment free from all forms of unlawful discrimination and harassment.

Location

Rhode Island Hospital - 593 Eddy Street Providence, Rhode Island 02903

Work Type

M-F 8:30am-5:00pm

Work Shift

Day

Daily Hours

8 hours

Driving Required

No