Data Architect / Engineer (f/m/x) - Biomedical Software Ecosystem

Sysmex Europe SE; Hamburg; Hybrid; EUR 90,000 - 130,000; Full time

Benefits offered by this job

Christmas and vacation pay

Childcare allowance

Capital-forming benefits

Company pension scheme subsidy

Canteen lunch subsidy

Relocation assistance

Job summary

Sysmex Europe SE in Hamburg is seeking a Data Architect & Engineer to design and optimize end-to-end data flows across our biomedical software ecosystem. You will enable scalable, compliant data pipelines for analytics and AI-driven applications in a regulated healthcare setting.

You will define data models, ensure data quality and lineage, and collaborate with cross-functional teams to translate regulations into practical data solutions while advancing our hybrid cloud strategy and platform

Qualifications

• Degree in Computer Science, Data Engineering, Bioinformatics or a related field.

Responsibilities

• Design end-to-end data flows from device data ingestion to transformation, storage and consumption.
• Define data models, structures and lifecycle concepts to ensure data quality, consistency and lineage.
• Develop scalable data architectures and contribute to platform integration and strategy.
• Translate regulatory requirements into practical data solutions for internal stakeholders.
• Understand data structures and workflows across departments and customer environments to align with business objectives.
• Prototype and validate innovative data processing and analytics approaches.
• Build FAIR-compliant data workflows and robust ETL/ELT pipelines for analytics and ML.
• Ensure data governance, security and compliance with traceability and audit readiness.
• Communicate data concepts clearly to technical and non-technical stakeholders to support data-driven decisions.

Skills

Data engineering

Data architecture

Communication

Problem solving

Education

Bachelor’s degree in Computer Science or related field

Tools

AWS

Python

Airflow

ETL/ELT frameworks

Data lakes

Data warehouses

Orchestration tools

Job description

Sysmex is shaping the future of healthcare diagnostics with innovation and passion. In our new, modern headquarters in Hamburg, we offer a collaborative and inspiring work environment designed for creativity and growth. As part of a global team, you will contribute to improving patients’ healthcare journeys every day. Join us and experience a workplace that combines cutting-edge technology with a culture of openness and development and live our mission every day: Together for a better healthcare journey.

Your Role

As Data Architect & Engineer (f/m/x) in our Digital Lab Solutions department, you will design, build and optimize end-to-end data flows across our biomedical software ecosystem, with a strong focus on device-generated data from customer environments. You enable scalable, compliant and high-quality data pipelines to power advanced analytics, AI-driven applications and digital lab services.

Your key responsibilities include:

• Designing and implementing end-to-end data flows from device data ingestion through transformation, storage and consumption
• Defining data models, structures and lifecycle concepts to ensure data quality, consistency and lineage
• Developing scalable data architectures and contributing to platform integration, hybrid ecosystem design and technology strategy
• Interpreting and representing regulatory requirements for data usage towards internal stakeholders, including Regulatory Affairs
• Understanding data structures, workflows and requirements across departments and customer environments to align with business and scientific objectives
• Identifying, prototyping and validating innovative data processing and analytics approaches through data-centric proof-of-concept solutions
• Building FAIR-compliant data workflows and robust ETL/ELT pipelines to create high-quality, analysis-ready datasets for analytics and machine learning
• Ensuring data governance, security and compliance by enabling traceability, lineage and audit readiness across the data lifecycle
• Communicating data concepts and insights clearly to technical and non-technical stakeholders to support data-driven decision-making

Your Profile

You are a strong match if you combine hands-on data engineering and architecture expertise with a structured mindset, strong communication skills and a passion for data-driven innovation in healthcare.

Ideally, you bring the following qualifications and strengths:

• Degree in Computer Science, Data Engineering, Bioinformatics or a related field
• 3+ years of experience in data engineering and/or data architecture, ideally in healthcare, diagnostics or other regulated environments
• Strong experience in designing end-to-end data pipelines and data flow architectures as well as solid knowledge of distributed systems, cloud platforms (e.g. AWS), data architectures (e.g. data lakes, warehouses, event-driven systems), ETL/ELT frameworks, orchestration tools (e.g. Airflow) and Python programming
• Knowledge of regulatory and data compliance requirements (e.g. GxP, ISO, GDPR) with the ability to translate them into practical data solutions; experience in regulated environments is a plus
• Experience with DevOps and CI/CD practices, ideally familiarity with infrastructure as code, MLOps or statistical analysis
• Experience with device-generated or IoT-like data is a plus
• Strong analytical, problem-solving and communication skills with the ability to translate complex data topics into business value

Culture & cooperation:

An appreciative work environment, open corporate culture, flat hierarchies and an inclusive and caring atmosphere. Working in an innovative and international environment with a broad learning and development landscape in our EMEA Campus, after-work events for internal networking.

Work-life balance:

Flexible working through flextime and a hybrid working model (60% mobile working, 40% on-site), 30 days annual leave.

Additional benefits:

Attractive compensation package including Christmas and vacation pay, childcare allowance, capital-forming benefits, subsidy for company pension scheme, corporate benefits, relocation assistance, subsidised lunch in our canteen.

Health & wellbeing:

Subsidised EGYM Wellpass with access to 13,500 studios, plus in-house gym, various sports courses, massages, company medical and psychological care, workplace glasses, and general health management.

Mobility:

Subsidy for the public transport "Deutschlandticket", free parking, bike leasing via JobRad.

Social Responsibility:

Various opportunities to get involved in different sustainability and charity initiatives, climate friendly and respectful use of resources.

Do you have questions?

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