Proteomics Scientist (Mass Spec) — Flexible Work Options

Amgen

Thousand Oaks (CA)

On-site

USD 115,000 - 156,000

Full time

9 days ago
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Benefits offered by this job

Competitive benefits
Total Rewards Plan
Flexible work options

Job summary

Amgen in Thousand Oaks, California, is seeking a Scientist or Senior Scientist in mass spectrometry–based proteomics to generate proteomic insights that support target identification, drug discovery, and screening technology development.

You will design and implement high-throughput proteomics workflows, perform automated sample preparation and LC–MS/MS analyses, and collaborate with biology and chemistry teams to accelerate the pipeline.

Qualifications

  • Doctorate degree (PhD, PharmD, or MD) with relevant experience.
  • OR Master’s degree with 2 years of directly related experience.
  • OR Bachelor’s degree and 4 years of directly related experience.
  • Preferred: Doctorate in proteomics, chemoproteomics, biochemistry, chemistry, analytical science, or related.
  • Hands‑on experience developing, optimizing, and applying mass spectrometry–based proteomics assays and workflows.
  • Experience operating and troubleshooting advanced LC–MS/MS platforms, such as Orbitrap‑based systems, and analyzing proteomics data.
  • Experience with high‑throughput sample preparation, miniaturization, and laboratory automation platforms.
  • Demonstrated ability to develop, refine, or scale assays, analytical methods, or proteomics platforms.
  • Quantitative and computational experience analyzing complex, high‑dimensional proteomics datasets.
  • Experience working in a biotechnology, pharmaceutical, or drug‑discovery research environment is preferred.
  • Ability to work effectively in a highly integrated, collaborative team environment; strong organizational, verbal, and written communication skills; and a demonstrated commitment to generating reliable, reproducible results.

Responsibilities

  • Design, develop, optimize, and implement high-throughput mass spectrometry–based proteomics workflows and screening platforms to accelerate drug discovery.
  • Execute automated sample preparation and LC–MS/MS analyses across a broad range of high-throughput proteomics assays.
  • Collaborate closely with therapeutic area, biology and chemistry teams as a technical and scientific subject‑matter expert, contributing to data‑driven decision‑making.
  • Analyze and interpret proteomics data to generate insights into mechanism of action, target engagement, selectivity, and other key drug‑discovery questions.
  • Operate, maintain, troubleshoot, and continuously improve high-throughput mass spectrometry systems and associated analytical workflows.
  • Present research findings at internal and external meetings, and clearly communicate experimental plans, results, and analyses to cross‑functional teams.
  • Maintain accurate, organized, and timely documentation of experiments, protocols, methods, and data analyses.

Skills

Mass spectrometry expertise
Proteomics
High-throughput workflows
Team collaboration
Troubleshooting

Education

PhD/MD/PharmD
Masters degree
Bachelor degree

Tools

Orbitrap LC-MS/MS
High-throughput automation

Job description

Amgen in Thousand Oaks, California, is seeking a Scientist or Senior Scientist in mass spectrometry–based proteomics to generate proteomic insights that support target identification, drug discovery, and screening technology development.

You will design and implement high-throughput proteomics workflows, perform automated sample preparation and LC–MS/MS analyses, and collaborate with biology and chemistry teams to accelerate the pipeline.

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