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Externally Funded Doctoral Student (m/f/d) – Epigenetic Regulation of Pancreatic Cancer Cell Plasticity (Johnsen group), Stuttgart
Location:
Stuttgart, Germany
Job Category:
Other
EU work permit required:
Yes
Job Reference:
4aae443512f1
Job Views:
1
Posted:
02.05.2025
Expiry Date:
16.06.2025
Job Description:
- Utilize modern sequencing-based molecular biology approaches (RNA-seq, ChIP-seq, HiChIP, Hi-C, PRO-seq, etc.) to test hypotheses and examine epigenetic and gene regulatory mechanisms controlling pancreatic tumor cell identity and therapy response.
- Bioinformatic analysis and interpretation of data followed by hypothesis testing and generation.
- Perform multiplex immunofluorescence staining to confirm gene regulatory mechanisms in primary tumor tissue using multispectral imaging with an Akoya PhenoImager.
- Prepare histological samples (FFPE tumor material) for single cell RNA-sequencing using 10X Genomics technology.
- Conduct advanced cell culture experiments to examine the effects of drug treatment in various translational model systems.
- Participate in internal or external research collaborations.
- Document work procedures, data acquisition, and analyses.
Qualifications
- Completed a Master of Science in a related field (biology, molecular biology, biotechnology, or similar).
- Must have secured or be able to secure external funding for their position (e.g., doctoral fellowship from DAAD, China Scholarship Council, or similar).
- Experience with cell culture, transfections, etc.
- Extensive molecular biology experience (real-time PCR, Western blot, etc.).
- Strong interest in learning and gaining proficiency in bioinformatic analyses.
- Strong work ethic and high level of self-motivation.
- Independent, goal-oriented, and structured working style with the ability to work in a team.
- Confident written and spoken English skills.
Additional Information
We offer you:
- An exciting and international research environment.
- Excellent experience and expertise in modern epigenetic methods.
- Outstanding bioinformatic expertise.
- Extensive modern infrastructure for all methods related to the project.
- Working in a committed team, characterized by mutual appreciation and support.
- Proven track record of successfully supervising more than 20 doctoral students.
- Long track record in gene regulation and cancer research.
This position is contingent upon the applicant having attained or attaining an externally funded fellowship for the duration of their project.
Contact:
Prof. Dr. Steven A. Johnsen
Scientific Director
E-Mail: