Chen Lab - Research Specialist (Biological and Medical Informatics)

University of California, San Francisco; San Francisco (CA); On-site; USD 55,000 - 194,800; Full time

Job summary

The Chen Laboratory at the University of California, San Francisco is seeking a computational biologist to join the Department of Radiation Oncology at the Junior, Assistant, Associate, or Full Specialist level. The role integrates cancer genomics, cell biology, and Imaging Mass Cytometry to study prostate cancer and translate findings to the clinic.

You will assist with ongoing experiments and may conduct independent research under Dr.

Qualifications

• Strong background in bioinformatics, computer science, or computational biology.
• Outstanding written and oral communication skills.
• Self-motivated, fast learner, critical thinker; work well in a team.

Responsibilities

• Design and implement analyses of high-dimensional data (e.g., single-cell RNA sequencing).
• Utilize bioinformatics tools and databases to uncover biological insights.
• Work independently with team support to complete data analysis.

Skills

Bioinformatics

Computational biology

Teamwork

Communication

Self-motivated

Education

Bachelor's degree

Master’s degree

Terminal degree / PhD

Job description

Research Specialist (Biological and Medical Informatics) – Chen Lab

University of California, San Francisco

Department of Radiation Oncology

Position Description

The Chen Laboratory at the University of California, San Francisco is seeking to recruit an outstanding candidate to fill a computational biologist position at the Junior, Assistant, Associate, or Full Specialist Level. Research in the Chen Lab focuses on (1) identifying molecular drivers of prostate cancer pathogenesis, (2) understanding the mechanisms that contribute to disease progression and metastasis, and (3) developing novel therapeutic strategies. Our lab utilizes cancer genomics, cell biology, and other tumor profiling approaches complementary to multiplexed single-cell imaging measured using Imaging Mass Cytometry (IMC) to answer fundamental questions underlying prostate cancer biology, with the goal of translating discoveries from the lab into the clinic. We work collaboratively with basic scientists, computational biologists, pathologists, and oncologists at the UCSF Helen Diller Cancer Center.

The role of the Specialist is to both assist with ongoing experiments and, depending on the candidate’s skill level, conduct independent research under the guidance of Dr. Chen and other members of the Chen Lab. The Specialist will learn and utilize a variety of research techniques and will have the opportunity to be a co-author on publications.

Job Responsibilities

• The ideal candidate should have a strong background in bioinformatics, computer science, or computational biology, along with general experience in the life sciences.
• The candidate will contribute to designing and implementing analyses of high-dimensional data (e.g., single-cell RNA sequencing, germline (e.g. whole-genome) sequencing (WGS) data, proteomics, digital pathology).
• The candidate will be able to utilize standard bioinformatics tools and databases to uncover biologically meaningful insights that address key research questions.
• The candidate will be expected to work independently with support from team members to complete independent data analysis.

Required Qualifications

• Applicants need to be self-motivated, fast learners, critical thinkers, and enthusiastic about science and medicine.
• Applicants need to work well as part of a team and have outstanding written and oral communication skills.
• Specialists appointed at the Junior rank must possess a baccalaureate degree (or equivalent degree) or 4 years of relevant research experience.
• Specialists appointed at the Assistant rank must possess a master’s degree or a baccalaureate degree with 3 or more years of research experience.
• Specialists appointed at the Associate rank must possess a master’s degree (or equivalent degree) or 5-10 years of relevant research experience.
• Specialists appointed at the Full Specialist rank must possess a terminal degree (or equivalent degree) or ten or more years of experience in the relevant specialization.

Preferred Qualifications

• Prior independent research experience with standard genomic and transcriptomic analyses.
• Experience implementing and routinely documenting data analysis pipelines for the research
• Experience with cloud-based storage and service tools is essential
• Preference for the Junior Specialist position may be given to applicants interested in pursuing a biomedical sciences PhD or MD/PhD.

Salary and appointment will be commensurate with the applicant's experience and training. This position is available immediately. Please apply online at https://aprecruit.ucsf.edu/JPF05971. Applicants’ materials must list current and/or pending qualifications upon submission.

See Table 24B for the salary range for this position. A reasonable estimate for this position is $55,000-$194,800.

Document Requirements

• Curriculum Vitae - CV must clearly list current and/or pending qualifications (e.g. board eligibility/certification, medical licensure, etc.).
• Cover Letter
• Statement of Research (Optional)
• Statement of Teaching (Optional)

Reference Requirements

• 2-4 required (contact information only)

As a University employee, you will be required to comply with all applicable University policies and/or collective bargaining agreements, as may be amended from time to time. Federal, state, or local government directives may impose additional requirements.

The University of California is an Equal Opportunity Employer. All qualified applicants will receive consideration for employment without regard to race, color, religion, sex, sexual orientation, gender identity, national origin, disability, age, protected veteran status, or other protected status under state or federal law.

UCSF is committed to welcoming and serving all people, honoring the dignity of every individual without preference or prejudice, in support of its public mission and in alignment with our PRIDE values and Principles of Community.

As a condition of employment, the finalist will be required to disclose if they are subject to any final administrative or judicial decisions within the last seven years determining that they committed any misconduct.

• Misconduct means any violation of the policies or laws governing conduct at the applicant’s previous place of employment, including, but not limited to, violations of policies or laws prohibiting sexual harassment, sexual assault, or other forms of harassment, or discrimination, as defined by the employer.
• UC Sexual Violence and Sexual Harassment Policy
• UC Anti-Discrimination Policy
• APM - 035: Affi

San Francisco, CA