Senior Bioinformatician - End-to-End Pipelines & Impact

Generare Bioscience; Île-de-France; Remote; EUR 70,000 - 110,000; Full time

Job summary

Generare Bioscience seeks a Senior Bioinformatician to own projects from scoping with wet-lab colleagues to delivering production-ready analyses and tools that inform future experiments.

You can be based in Paris or work fully remote from anywhere in France, with English as the working language. You will develop pipelines with Nextflow and cloud batch, building robust software and communicating results clearly to the biology team.

Qualifications

• 3+ years after your degree or PhD as a main contributor on engineering or scientific projects.
• Turn a biological question into a scoped analysis and explain results to non-bioinformaticians, in English.
• Proficient Python for data analysis (pandas, NumPy) with solid statistics and experimental design.
• Engineering practices: git, testing, packaging, containers and documentation.
• AI-assisted coding fluently, with ability to review, test and own outputs.
• Experience building pipelines with Nextflow or Snakemake and running on HPC (SLURM) or cloud batch.
• Nanopore sequencing data analysis (amplicon and/or WGS).
• Language: English working proficiency.

Responsibilities

• Project ownership from scoping with wet-lab colleagues to delivering analyses or tools.
• Deliver results that guide next wet-lab experiments and explain them clearly to non-bioinformaticians.
• Hand over what you build so others can use, maintain and trust it.
• Build software bricks that integrate into production workflow.
• Develop and run pipelines with Nextflow and cloud batch; apply solid engineering practices.
• Analyze Nanopore sequencing data from raw reads to final results; ensure robust design and statistics.
• Work in a small distributed team with autonomy and ownership of projects.

Skills

Python (data analysis)

Git

AI-assisted coding

English proficiency

Engineering practices

Education

PhD or MSc in a relevant field

Tools

Nextflow

Snakemake

HPC (SLURM)

Containers / Docker

Cloud batch

Job description

Generare Bioscience seeks a Senior Bioinformatician to own projects from scoping with wet-lab colleagues to delivering production-ready analyses and tools that inform future experiments.

You can be based in Paris or work fully remote from anywhere in France, with English as the working language. You will develop pipelines with Nextflow and cloud batch, building robust software and communicating results clearly to the biology team.