Senior Bioinformatician

DeepLife; Paris; On-site; EUR 45,000 - 65,000; Full time

Job summary

DeepLife is seeking a Senior Bioinformatician to design sequencing pipelines and oversee omics acquisition strategies. The role includes participating in drug discovery projects and publishing academic work. Candidates should have strong bioinformatics experience, particularly with multiple omics, and be proficient in R, Python, and Bash.

The position is based in Paris or remote, with a competitive salary based on experience. DeepLife values ambition, creativity, tolerance, and goal orientation in tackling impactful problems.

Qualifications

• 3 years in bioinformatics required.
• Experience in bulk and single cell sequencing pipelines.
• Expertise in biochemistry necessary.
• Strong programming skills in R, Python, and Bash.
• Software engineering skills for code quality.

Responsibilities

• Design sequencing pipeline on multiple omics.
• Oversee omics acquisition strategy.
• Work on drug discovery projects.
• Design biological experiments for specific questions.
• Publish and participate in academic conferences.

Skills

R

Python

Bash

Quoting multiple omics

Designing sequencing pipelines

Software engineering

Education

PhD or post-doc in bioinformatics

Job description

DeepLife is an early stage startup founded in 2019 by Jonathan Baptista and Jean-Baptiste Morlot, backed by international investors, developing a digital twin of human cells.

While we are able to design and build incredibly complex mechanical engines, engineering biological systems, such as cells, remains a challenge. However, recent technological improvements, notably in biochemistry, recently enabled the construction of databases with millions of quantitative cell activity measures, covering multiple diseases.

The DeepLife team develops a SaaS platform combining state-of-the-art machine learning algorithms on single cell multi-omics data, public and private cell atlases, and a proprietary deep learning-based digital twin. Our goal is to supplement in vitro testing with in silico simulations and rapidly discover molecular triggers to efficiently engineer cell behavior.

We are working closely with biotech and pharmaceutical companies to accelerate their target identification processes. We are also collaborating actively with the academic community by publishing papers and providing open access to our platform’s features and data.

Job Description

As Senior Bioinformatician, you will:

• Design sequencing pipeline on multiple omics (bulk + single cell)
• Be on charge of the omics acquisition strategy
• Work on multiple drug discovery project with our partners and customers
• Participate to design biological experiments to answer specific questions
• Publish and participate to academic conferences

Qualifications

Minimum:

• 3 years in bioinformatics
• Experience in developing bulk and single cell sequencing pipelines on multiple omics
• Expertise in biochemistry
• Strong experience in R, Python and Bash
• Skills in software engineering: Producing, testing, reviewing and debugging code

Nice to have:

• PhD or post-doc in bioinformatics
• Skills in writing academic articles
• Skills in image analysisBe a tech enthusiast

Additional Information

Our Values

Our values summarizes in four known letters …

Ambitious: We aim for moon-shot projects but with concreate technical and business milestones.

Creative: We think-out of the box to push back established boundaries in an error-friendly environment, so we fail fast and learn fast.

Tolerant: We support each other, so the team is more than the sum of its individuals.

Goal-oriented: We build efficient solutions to solve impact problems.

Terms

• Position based in Paris or remote (given the current sanitary context)
• Competitive salary based on experience and work record.

Job Location