Bioprocess Data Engineer

MicroHarvest; Hamburg; On-site; EUR 70,000 - 95,000; Full time

Job summary

MicroHarvest GmbH is seeking a Bioprocess Data Engineer to transform complex fermentation data into actionable insights. You will connect equipment, sensors, and systems to enable real-time data collection and build data pipelines and dashboards using Python, SQL, and Power BI.

You will work across bioprocess engineering, instrumentation and automation to improve data capture, reliability, and scalability while helping shape our digitalization roadmap and digital twin initiatives.

Qualifications

• Degree in a relevant engineering/technological field.
• Strong programming skills in Python and SQL for data processing, automation and reporting.
• Experience with version-controlled development using GitHub.
• Understanding of industrial sensors, instrumentation, and communication protocols (OPC UA, Modbus).
• Experience in dashboard development and data visualization.

Responsibilities

• Connect data across pilot plant, R&D activities, and other locations to enable data-driven decisions.
• Link equipment, sensors and systems (bioreactors, scales, gas analyzers) for real-time data collection and integration.
• Develop automated calculations, reporting tools, data pipelines, and dashboards using Python, SQL, and Power BI.
• Bridge bioprocess engineering, instrumentation, data engineering and automation to improve data capture and use.
• Contribute to digitalization roadmap and pilot plant testing for scalable solutions.
• Help develop digital twins, kinetic models, and process simulations to improve fermentation understanding and scale-up.
• Collaborate with engineers, scientists, vendors, and internal teams to define integration requirements.

Skills

Python

SQL

Data visualization

Communication

GitHub

Education

Bachelor’s or Master’s in Electrical Engineering, Mechanical Engineering, Data Engineering, Chemical Engineering, Bioprocess Engineering, or related field

Tools

Power BI

OPC UA

Modbus

Job description

At MicroHarvest, we’re reinventing how the world produces protein — fast, sustainably, and at scale. By harnessing the power of microorganisms, we create nutritious proteins that can be made anywhere, helping solve one of humanity’s biggest challenges: feeding a growing world sustainably.

We’re now looking for a Bioprocess Data Engineer to connect the dots between biotechnology, engineering, and data — and help us build the digital backbone of our fermentation processes.

In this hands‑on role, you’ll turn complex process data into meaningful insights, connect equipment and systems, and develop smart solutions that make our operations more efficient, reliable, and scalable. From solving everyday data challenges to shaping our long‑term digitalization strategy, you'll play a key role in bringing our bioprocesses into the digital future.

What you’ll be doing:

• Connect the dots: Structure and standardize process data across our pilot plant, I&D activities, and other locations — creating a reliable foundation for data‑driven decisions.
• Make data flow: Connect equipment, sensors, and systems (such as bioreactors, scales, and gas analyzers) to enable reliable, real‑time data collection and integration.
• Turn data into insights: Develop automated calculations, reporting tools, data pipelines, and dashboards using Python, SQL, Power BI, or similar tools.
• Build smarter processes: Bridge the gap between bioprocess engineering, instrumentation, data engineering, and automation to improve how we capture, manage, and use process data.
• Shape our digital future: Help develop our long‑term digitalization and automation roadmap, using our pilot plant as a testing ground for solutions that can scale to future industrial operations.
• Bring processes to life digitally: Work towards developing digital twin capabilities, kinetic models, and process simulations to improve fermentation process understanding, optimization, and scale‑up.
• Collaborate across disciplines: Work closely with engineers, scientists, equipment vendors, and internal teams to define integration requirements and build practical, scalable solutions.

What you bring:

• A degree in Electrical Engineering, Mechanical Engineering, Data Engineering, Chemical Engineering, Bioprocess Engineering, or a related field.
• Strong programming skills, particularly in Python and SQL, with experience in data processing, automation, and reporting.
• Experience with version‑controlled development using GitHub.
• Understanding of industrial sensors, instrumentation, communication protocols (such as OPC UA and Modbus), and equipment integration.
• Familiarity with dashboard development, data visualization, and user‑friendly interfaces.
• A structured, proactive mindset and the ability to turn complex technical challenges into practical solutions.
• Strong communication skills and the ability to connect people and ideas across engineering, biology, and data.
• A hands‑on attitude — you're just as comfortable working with hardware on‑site as you are writing code.
• Curiosity, adaptability, and the motivation to build solutions in a fast‑moving, evolving environment.

Bonus points for:

• Hands‑on experience in an industrial or pilot‑scale bioprocess environment.
• Knowledge of bioprocess calculations, fermentation processes, and process performance indicators.
• Familiarity with digital twin concepts, kinetic modelling, or process simulation tools.
• Experience using AI tools to accelerate development and improve workflows.
• Experience working in startups or scale‑ups, where building systems from scratch is part of the adventure.

At MicroHarvest, you’ll be part of a fast‑moving team where bold science meets hands‑on action and real results. We offer:

• A high‑impact role in a purpose‑driven company changing the future of food.
• A collaborative, international team that celebrates curiosity and learning.
• Freedom to shape digital tools, processes, and systems — and see your solutions make a real difference.
• The opportunity to work at the intersection of biotechnology, engineering, and digital innovation, helping shape how we scale our technology.

Here, your work doesn't just connect data. It connects science, technology, and the future of sustainable food production.

Ready to turn data into impact?

At MicroHarvest, we value diversity and as such we do not discriminate based on race, colour, religion, sex, sexual orientation, gender identity or expression, national origin, age, disability, veteran status, marital status, or based on an individual’s status in any group or class protected by applicable laws. MicroHarvest respectfully encourages people from all backgrounds and under‑represented groups to apply for this position.