Single-Cell Genomics Scientist - iPSC & 3D Culture Analytics

alleninstitute; Seattle (WA); Hybrid; USD 86,150 - 106,650; Full time

Benefits offered by this job

Medical, dental, vision coverage

401k plan

Paid time off

Job summary

The Allen Institute for Cell Science is seeking a Scientist I to support computational analysis of single-cell RNA-seq data in human iPSC-derived 3D culture systems. The role emphasizes robust workflows, data visualization, and collaboration with experimental and computational teams to drive biological insights.

The position requires strong biological grounding and quantitative skills, with opportunities to develop and share reproducible analysis tools and pipelines across projects.

Qualifications

• PhD in a relevant field or equivalent experience.
• Experience analyzing single-cell RNA-seq datasets.
• Proficiency in R and/or Python for biological data analysis.
• Experience developing reproducible analysis workflows and clear data visualizations.

Responsibilities

• Analyze single-cell RNA-seq datasets to characterize cell states and heterogeneity.
• Develop reproducible analysis workflows, code, and visualizations.
• Build and maintain R Shiny applications and related outputs for data exploration.
• Collaborate with experimental and computational colleagues to interpret findings and align analysis plans.
• Support data organization, documentation, and version control for collaboration.

Skills

R

Python

Data visualization

Reproducible workflows

Communication

Education

PhD in biology-related field

Tools

R Shiny

Git

Linux

Job description

The Allen Institute for Cell Science is seeking a Scientist I to support computational analysis of single-cell RNA-seq data in human iPSC-derived 3D culture systems. The role emphasizes robust workflows, data visualization, and collaboration with experimental and computational teams to drive biological insights.

The position requires strong biological grounding and quantitative skills, with opportunities to develop and share reproducible analysis tools and pipelines across projects.