Research Scientist, Data Analysis

E11 Bio; San Francisco (CA); On-site; USD 120,000 - 210,000; Full time

Job summary

Arbor Neuroscience in San Francisco is seeking a data-driven scientist to analyze longitudinal ultrasound and electrophysiology datasets and to build tooling for analysis pipelines.

You will work with a highly quantitative team from study design to interpretation, develop online analysis methods, and contribute to experimental design and decision making.

Qualifications

• PhD or equivalent in a quantitative field relevant to neuroscience.
• Strong background in signal processing, statistics, and ML for biomedical data.
• Proven ability to develop or contribute to analysis pipelines.

Responsibilities

• Analyze longitudinal ultrasound and electrophysiology datasets.
• Build tooling and pipelines for data analysis and visualization.
• Collaborate with experimentalists from design through interpretation.
• Develop online analysis methods and contribute to closed-loop study design.
• Participate in high-level scientific decisions and strategy.

Skills

Quantitative background

Signal processing

Statistics & inference

Machine learning

Programming

Computational neuroscience

Data analysis

Education

PhD in neuroscience or related field

Tools

Python

MATLAB

Git

SciPy/NumPy

Job description

About Arbor Neuroscience

(formerly Forest Neurotech)

Arbor is a nonprofit research organization working on one of the hardest open problems in clinical neuroscience: how to change brain circuits by design.

Millions of people with depression, chronic pain, and other brain disorders have no treatment that works. Modulating activity in the brain circuits underlying their symptoms – with electrical stimulation, focused ultrasound, or magnetic stimulation – can work spectacularly well. But it doesn't work reliably, and we can't predict who it will help.

That's what Arbor aims to fix. The starting point is a new class of experiment: intervene, measure how the circuit responds, track the symptom, and repeat in the same individual over months. We’re building the necessary experimental platform. It currently includes the Forest 1 ultrasound system, which works like a wearable functional MRI, but with higher resolution. The system images activity across large brain volumes, including deep brain structures, and will soon stimulate as well. We are also adding electrode-based interfaces in animal studies. From these data, we'll build models to make neuromodulation predictable.

Arbor is a Focused Research Organization within the Convergent Research family, and the new name for Forest Neurotech. We're a mission-focused nonprofit, doing multidisciplinary translational work that doesn't fit in a lab or on a company roadmap. We have the funding to run the first phase, and we're a small team – the people we hire now will shape what Arbor becomes.

The Role

This is the person who turns our experiments into results.

Arbor is generating novel datasets. In humans, we image deep brain structures with functional ultrasound, and we will soon be adding ultrasound neuromodulation. Those studies are longitudinal and causal: intervene, image the circuit response, track the symptom, and repeat in the same person over months. In animals, we combine this bidirectional ultrasound with electrophysiological stimulation and recording, giving us causal measurements across a wide range of spatial and temporal scales, in the same subjects over time.

Your primary responsibility is the analysis of those data and the tooling around them, working with a highly quantitative experimental team from the design stage onward. Because these studies will be longitudinal and closed-loop, there will also be a need for optimal experiment design, online analysis implementations, and closed-loop control.

We're hiring at multiple levels and will calibrate scope and title to your experience: at the earlier end, you'd own the analysis work in close collaboration with the scientific team; with more experience, you'd set the computational direction for the organization.

We're also still a small, startup-like organization, so everyone fills multiple roles, including hands‑on science and the work that gets science done.

What You’ll Do

• Own analysis of Arbor's experimental data, including functional ultrasound imaging and electrophysiology, along with the tooling that supports it
• Work with the experimental team from study design through interpretation, so we answer the highest-priority questions
• Develop image processing tools: registration and alignment, artifact handling, and whatever else the data demands
• Help design algorithms for intervention optimization and adaptive experiment design
• Develop online and real-time analysis methods to support closed‑loop experiments
• Build methods for integrating data across modalities and scales
• Contribute to high‑level scientific decisions about where the organization is going

Not all of this is one person's job. Where you start depends on your strengths and on what the program needs most.

Who We’re Looking For

The successful candidate will have:

• A strong quantitative background: a PhD, or comparable training in an equally demanding environment such as industry
• Real depth in several of: signal processing, statistics and inference, machine learning, medical or brain imaging analysis, control theory, computational neuroscience; we don't expect all of them
• Strong coding skills
• A significant body of independent work you can point to
• The judgment to tell a problem that can be solved with standard statistical methods from one that requires a more sophisticated approach – and the discipline to prefer the simpler answer
• A self-starter with the skills and instinct to find the shortest effective path to the scientific goal, rather than the most interesting one
• Directness without friction – you say what you think, ask when you don't know, and aren't looking to compete with your colleagues

Nice to have: experience in a professional software development environment; a public record of algorithm or code development on GitHub or similar; experience with ultrasound, neural, or medical imaging data; prior work in a research setting where you had to build the tooling yourself.

You don't need a neuroscience background. You do need to want one. Some of the best people to have worked on these problems originally came from another field.