PhD position in Computational and Developmental Biology in Berlin (m/f/d)

Job Title: PhD position in Computational and Developmental Biology in Berlin (m/f/d)

Client:

MDC

Location:

Berlin, Germany

Job Category:

Education

EU work permit required:

Yes

Job Reference:

1c0696313d74

Job Views:

1

Posted:

16.05.2025

Expiry Date:

30.06.2025

Job Description:

• You will develop new algorithms to infer cellular differentiation trajectories in the developing embryo from time-resolved single-cell RNA, spatial transcriptomics, and lineage tracing data.
• You will use machine learning methods to combine spatial transcriptomics data with other data modalities such as single-cell transcriptome or advanced microscopy data.
• You will compare mouse embryonic development with other species (e.g., human, fish, bird) and synthetic embryo models.
• You will analyze and compare synthetic organoid development with in vivo embryonic development.
• You will work closely with experimental collaborators.
• You will be an active member of a highly interdisciplinary team involving data scientists and biological researchers.

Requirements:

• MSc degree in computational or natural sciences.
• Strong computational or quantitative focus (computational biology, bioinformatics, mathematics, or related fields).
• Strong programming skills (Python, R); experience in software development is a plus.
• Excellent communication skills for collaboration.
• Solid statistical knowledge and experience with machine learning methods.
• Ability to work independently and handle challenging analysis tasks.

We offer:

• An international environment with communication in English and German.
• Career development and training opportunities.
• Work-life balance support certified by the 'berufundfamilie' audit.
• Support for new Berlin residents through the MDC Welcome & Family Office.
• On-campus health and fitness facilities.
• Stimulating research environment with excellent science.
• Opportunity to work on cutting-edge biomedical data.
• Potential to become an expert in single-cell genomics and machine learning approaches.

Additional benefits include:

• Remuneration according to the collective agreement for the federal public service (TVöD-Bund), including pension schemes.
• Flexible working hours and childcare support.
• Subsidy for the job ticket.
• Additional health benefits such as flu vaccination, eye tests, and ergonomic workplace advice.