Software Engineer (Bioinformatics team)

phagos; Suresnes; Sur place; EUR 40 000 - 60 000; Plein temps

Résumé du poste

A bioinformatics company in Suresnes is seeking a motivated software engineer to join their dynamic team. The role focuses on writing, reviewing, and optimizing bioinformatics scripts, collaborating closely with bioinformaticians. The ideal candidate should have a Bachelor's degree in Computer Science, proficiency in Python, Docker, and HTML, and be fluent in English. Impactful work in a collaborative environment awaits you.

Qualifications

• Bachelor's degree in Computer Science or a related field is required.
• Proficiency in Python, Docker, and HTML.
• Professional working proficiency in English (both writing and spoken).

Responsabilités

• Write, understand, and review scripts in bioinformatics workflows.
• Optimize and streamline existing bioinformatic pipelines.
• Collaborate with bioinformaticians to provide scripting support.

Connaissances

Python

Docker

HTML

R

PostgreSQL

Formation

Bachelor’s degree in Computer Science or related field

Description du poste

Overview

To achieve our ambitious goal, we are looking for a motivated software engineer to join our dynamic team. Your work will focus on writing, reviewing, and optimizing bioinformatics scripts and pipelines, ensuring robust, efficient data processing in our bioinformatics team. If you’re ready to play a critical role in our journey and make an impact, we’d love to hear from you!

Responsibilities

• Write, understand, and review Python, Bash, R, and Nextflow scripts in bioinformatics workflows
• Review, understand and optimize, and streamline existing bioinformatic pipelines, especially the infrastructure facilitating the logistics of input intermediate and output data
• Collaborate closely with bioinformaticians to provide scripting and technical support, refactor code according to best practice standards keeping ease of maintenance in mind
• Maintain the modular structure of our codebase

Desired profile

Required:

• Bachelor’s degree in Computer Science or related field.
• Proficiency in Python, Docker, and HTML
• Professional working proficiency in English (both writing and spoken).

Nice-to-Have (in order of priority):

• Prior knowledge in bioinformatics
• Able to present results with proper visualization
• Proficiency in R
• Familiarity with pipeline automation tools like Nextflow
• Proficiency with PostgreSQL

Interview process

At Phagos we believe the recruitment process begins from the application. This is why we invite you to take your time and thoughtfully complete our application form.

Once we select your profile, we are committed to making sure you have a positive and seamless experience!

Interview #1 with Andrew, Research Scientist in Bioinformatics.

Interview #2 with Adèle & Alex, our co-founders.

Interview #3 with 5 team members of Phagos, randomly chosen for a Teamfit discussion.