Pangenome Algorithms Engineer — C/C++ & Python

Universitat Politècnica de Catalunya (UPC)- BarcelonaTECH; España; Presencial; EUR 30.000 - 37.000; A tiempo parcial

Descripción de la vacante

Universitat Politècnica de Catalunya (UPC)- BarcelonaTECH in Spain is seeking a researcher to design, implement and accelerate algorithms and data structures for pangenome analysis and variation graphs. The role focuses on high-performance prototypes in C/C++ and Python, and involves collaboration with colleagues and partners in technology transfer projects.

You will work on scalable sequence-graph alignment, indexing and analysis of complex genomic data, with a strong emphasis on performance

Formación

• Algorithms and data structures for pangenome analysis.
• Mastery of C/C++ and low-level optimizations.
• Python for prototyping, data analysis and experiment automation.

Responsabilidades

• Design new algorithms and data structures for the analysis of pangenomes and variation graphs.
• Develop scalable methods for sequence-graph alignment, approximate search, indexing and analysis of complex genomic data.
• Design and implement high-performance prototypes in C/C++, Python and parallel environments.
• Collaborate with other team members and with academic or industrial partners in technology transfer projects.

Conocimientos

Algorithms and data structures

C/C++

Python

Educación

Bachelor Degree or equivalent

Descripción del empleo

Universitat Politècnica de Catalunya (UPC)- BarcelonaTECH in Spain is seeking a researcher to design, implement and accelerate algorithms and data structures for pangenome analysis and variation graphs. The role focuses on high-performance prototypes in C/C++ and Python, and involves collaboration with colleagues and partners in technology transfer projects.

You will work on scalable sequence-graph alignment, indexing and analysis of complex genomic data, with a strong emphasis on performance