Senior Principal Scientist, Quantitative Biosciences

MSD; Boston (MA); On-site; USD 214,000 - 337,000; Full time

Job summary

Merck & Co. seeks a Senior Principal Scientist in Boston to lead mass spectrometry-enabled discovery within the Quantitative Biosciences group. You will shape assay development, guide experimental design, and influence translational pharmacology decisions across discovery programs.

The role requires deep MS expertise, strong pharmacology insight, and a track record of scientific leadership, mentorship, and collaboration across sites and functions.

Qualifications

• Ph.D. or equivalent with 12+ years of relevant experience in pharma/biotech research, or MS and 15+ years for MS/MS paths.
• Deep expertise in MS-based assay development for drug discovery and translational science.
• Strong leadership, mentoring, and cross-functional collaboration across QB and discovery teams.

Responsibilities

• Lead the Boston mass spectrometry group to support in vitro and in vivo pharmacology needs.
• Shape MS-enabled assay development strategy, experimental design, and data interpretation for discovery programs.
• Mentor scientists and drive cross-functional alignment across QB and global teams.
• Provide scientific guidance on assay selection, study design, and mechanistic interpretation.
• Foster rigorous scientific practices and effective communication across multidisciplinary stakeholders.

Skills

Assay Development

Hit to Lead

In Vitro Pharmacology

In Vivo Pharmacology

Lead Optimization

Mass Spectrometry (MS)

Pharmacology

Education

Ph.D. or equivalent in biology, pharmacology, analytical chemistry, biochemistry, pharmaceutical sciences, or a related STEM discipline

Job description

Job Description

Senior Principal Scientist - Boston, MA

Overview

We are seeking a Senior Principal Scientist to provide scientific and strategic leadership for mass spectrometry-enabled discovery within the Quantitative Biosciences group in Boston. This role will help shape the application of mass spectrometry and quantitative pharmacology across discovery programs, strengthen experimental decision-making, and advance high-impact science through close partnership with local and global teams.

As a senior scientific leader in Quantitative Biosciences, you will lead the Boston mass spectrometry capability supporting in vitro and in vivo pharmacology, advise multidisciplinary project teams, and influence broader QB strategy. The successful candidate will combine deep technical expertise in mass spectrometry-based assay development with strong pharmacology insight, sound scientific judgment, and the ability to mentor scientists and drive cross‑functional alignment.

In this role, you will:

• Lead the Boston mass spectrometry group in support of in vitro and in vivo pharmacology needs and serve as a key scientific partner to discovery teams across QB.
• Shape strategy for mass spectrometry-enabled assay development, experimental design, data interpretation, and quantitative pharmacology applications across discovery programs.
• Partner with multidisciplinary project teams to develop and execute mass spectrometry-based assays that inform mechanism, potency, selectivity, exposure-response, and translational decision-making.
• Provide scientific guidance to bench scientists and project teams, supporting assay selection, study design, mechanistic interpretation, and data-driven recommendations.
• Build and strengthen connections across the local Boston team and broader global QB network to ensure consistency, rigor, and effective deployment of mass spectrometry capabilities.
• Foster a culture of scientific rigor, critical thinking, collaboration, inclusion, and open dialogue that elevates organizational capability and decision quality.
• Mentor and develop scientists by providing technical guidance, strategic perspective, and constructive scientific challenge.
• Communicate effectively in a highly collaborative, multi-disciplinary environment and influence decisions across organizational boundaries.

Education

• Ph.D. or equivalent in biology, pharmacology, analytical chemistry, biochemistry, pharmaceutical sciences, or a related STEM discipline AND 12+ years of relevant experience in a pharmaceutical, biotechnology, or closely related research setting; MS and 15+ years of experience; OR BS and 16+ years of experience

Required Experience and Skills

• Deep expertise in mass spectrometry-based assay development and application to drug discovery.
• Strong understanding of the drug discovery process, including hit finding, hit-to-lead, lead optimization, and pharmacology-driven decision-making.
• Demonstrated experience applying quantitative pharmacology principles to interpret biological systems and guide experimental strategy.
• Proven record of scientific leadership in a biopharmaceutical setting, with evidence of impact on discovery programs, publications, external scientific reputation, or internal platform advancement.
• Experience leading, managing, mentoring, or developing scientists in a research environment.
• Track record of independently designing experiments, interpreting complex data, and translating findings into clear project recommendations.
• Ability to simplify complex scientific challenges into actionable strategies and influence alignment across multidisciplinary teams.
• Excellent written and verbal communication skills, with the ability to present scientific concepts clearly to technical and non‑technical stakeholders.
• Highly self‑motivated, organized, and able to prioritize across multiple simultaneous projects.
• Experience integrating mass spectrometry readouts with pharmacology, biology, DMPK, or translational science to support discovery decisions.
• Demonstrated ability to work across sites, functions, and organizational boundaries to drive scientific consistency and impact.

Required Skills:

Assay Development, Hit to Lead, In Vitro Pharmacology, In Vivo Pharmacology, Lead Optimization, Mass Spectrometry (MS), Pharmacology

San Francisco Residents Only:

We will consider qualified applicants with arrest and conviction records for employment in compliance with the San Francisco Fair Chance Ordinance.

Los Angeles Residents Only:

We will consider for employment all qualified applicants, including those with criminal histories, in a manner consistent with the requirements of applicable state and local laws, including the City of Los Angeles' Fair Chance Initiative for Hiring Ordinance.

Employee Status:

Regular

Relocation:

Domestic/International

VISA Sponsorship:

Yes

Travel Requirements:

No Travel Required

Flexible Work Arrangements:

Not Applicable

Shift:

Not Indicated

Valid Driving License:

No

Hazardous Material(s):

n/a

Job Posting End Date:

09/25/2026

*A job posting is effective until 11:59:59PM on the day BEFOREthe listed job posting end date. Please ensure you apply to a job posting no later than the day BEFORE the job posting end date.

The salary range for this role is

$214,100.00 - $337,000.00

This is the lowest to highest salary we in good faith believe we would pay for this role at the time of this posting. An employee’s position within the salary range will be based on several factors including, but not limited to relevant education, qualifications, certifications, experience, skills, geographic location, government requirements, and business or organizational needs.

The successful candidate will be eligible for annual bonus and long-term incentive, if applicable.

We offer a comprehensive package of benefits. Available benefits include medical, dental, vision healthcare and other insurance benefits (for employee and family), retirement benefits, including 401(k), paid holidays, vacation, and compassionate and sick days. More information about benefits is available at https://jobs.merck.com/us/en/compensation-and-benefits.

As an Equal Employment Opportunity Employer, we provide equal opportunities to all employees and applicants for employment and prohibit discrimination on the basis of race, color, age, religion, sex, sexual orientation, gender identity, national origin, protected veteran status, disability status, or other applicable legally protected characteristics.As a federal contractor, we comply with all affirmative action requirements for protected veterans and individuals with disabilities. For more information about personal rights under the U.S. Equal Opportunity Employment laws, visit:

We are proud to be a company that embraces the value of bringing together, talented, and committed people with diverse experiences, perspectives, skills and backgrounds. The fastest way to breakthrough innovation is when people with diverse ideas, broad experiences, backgrounds, and skills come together in an inclusive environment. We encourage our colleagues to respectfully challenge one another's thinking and approach problems collectively.

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