HIV Genomics Bioinformatician & Pipeline Scientist

Axle; Oregon; Hybrid; USD 105,000 - 130,000; Full time

Benefits offered by this job

Medical coverage for employees

Paid time off and holidays

401K match up to 5%

Educational benefits

Referral bonus

Flexible Spending Accounts

Job summary

Axle, a bioscience and information technology company, is seeking a Bioinformatics Scientist to support HIV research within the NIAID DIR/IDSS. You will analyze genomic and clinical data, develop production pipelines, and contribute to scalable tools that empower NIH investigators.

You should have strong skills in sequencing analysis, scripting, and data interpretation, with 4+ years in bioinformatics. A bachelor’s degree is required; advanced degrees are preferred.

Qualifications

• Bachelor's degree in a related field; master's or PhD preferred.
• 4+ years of experience in bioinformatics and production pipelines.
• Expert-level proficiency in Python or R and at least one of C/C++, sh/bash.
• Experience with NGS data analyses (RNA-seq, WGS, ChIP-seq) and single-cell data.
• Ability to obtain a Public Trust clearance.

Responsibilities

• Provide bioinformatics analysis for HIV-related datasets.
• Develop and maintain high-throughput data pipelines.
• Offer programming support to disseminate research data.
• Collaborate with researchers and publication teams.
• Contribute to scalable resources for NIH investigators.

Skills

Statistical modeling

Scripting

Biological interpretation

Pipeline development

Collaboration

Education

Bachelor's degree in related field

Master's or PhD preferred

Tools

Docker

Nextflow

Snakemake

CWL/WDL

AWS / Cloud

Job description

Axle, a bioscience and information technology company, is seeking a Bioinformatics Scientist to support HIV research within the NIAID DIR/IDSS. You will analyze genomic and clinical data, develop production pipelines, and contribute to scalable tools that empower NIH investigators.

You should have strong skills in sequencing analysis, scripting, and data interpretation, with 4+ years in bioinformatics. A bachelor’s degree is required; advanced degrees are preferred.