Founding Bioinformatics Engineer: Build Scalable Genomics

Novaflow (YC S25)

San Francisco (CA)

On-site

USD 90,000 - 130,000

Full time

14 days+
Application generator

Turn this role into an interview — a resume and cover letter built around what this employer wants.

Get past ATS filters

Benefits offered by this job

Competitive salary and equity
401(k) with company match
Unlimited PTO
Monthly health and wellness stipend
Meals covered in-office
Team offsites and events

Job summary

An innovative biotech firm in San Francisco is seeking a Founding Bioinformatics Engineer to build and maintain bioinformatics pipelines. The role requires expertise in Python and/or R, plus experience managing cloud infrastructure on AWS or GCP. You will work directly with founding members and be integral in the development processes. Competitive salary, equity, and benefits, including unlimited PTO, are offered, alongside a unique opportunity to gain insights into startup dynamics.

Qualifications

  • 2+ years building bioinformatics pipelines or workflows.
  • Strong programming in Python and/or R.
  • Experience with AWS or GCP for workloads.

Responsibilities

  • Build and maintain bioinformatics pipelines.
  • Write clean, reproducible analysis code.
  • Manage cloud infrastructure for large-scale workloads.
  • Integrate bioinformatics tools and databases.
  • Validate outputs against real scientific standards.

Skills

Python
R
Bioinformatics pipelines
AWS
GCP
Linux/Unix
Molecular biology
Bioinformatics file formats

Education

Bachelor's or Master's in Computational Biology
PhD in related field

Tools

Nextflow
Snakemake
Docker

Job description

An innovative biotech firm in San Francisco is seeking a Founding Bioinformatics Engineer to build and maintain bioinformatics pipelines. The role requires expertise in Python and/or R, plus experience managing cloud infrastructure on AWS or GCP. You will work directly with founding members and be integral in the development processes. Competitive salary, equity, and benefits, including unlimited PTO, are offered, alongside a unique opportunity to gain insights into startup dynamics.
Get your free, confidential resume review.

or drag and drop your file here.

Similar jobs

Similar jobs worth comparing

Bioinformatics Engineer - Build AI-Driven Genomics Pipelines
Bioinformatics Engineer - Build AI-Driven Genomics Pipelines

Novaflow (YC S25) • San Francisco (CA)

On-site
USD 70,000 - 90,000
Remote Bioinformatics Scientist - Scalable Genomics Pipelines
Remote Bioinformatics Scientist - Scalable Genomics Pipelines

Discover International • San Francisco (CA)

Remote
USD 100,000 - 140,000
Cloud Bioinformatics Engineer – Genomics Pipelines
Cloud Bioinformatics Engineer – Genomics Pipelines

Harvard University • Boston (MA)

Hybrid
USD 120,000 - 180,000
Generous paid time off
Medical, dental, and vision insurance
Retirement plans
+2
Founding Bioinformatics Engineer
Founding Bioinformatics Engineer

Novaflow (YC S25) • San Francisco (CA)

On-site
USD 90,000 - 130,000
Competitive salary and equity
401(k) with company match
Unlimited PTO
+3
Founding ML Engineer - Build Bio AI Pipelines & Impact
Founding ML Engineer - Build Bio AI Pipelines & Impact

Novaflow (YC S25) • San Francisco (CA)

On-site
USD 150,000 - 260,000
Competitive salary and equity
401(k) with company match
Unlimited PTO
+3
Senior Staff Engineer/Scientist, Bioinformatics
Senior Staff Engineer/Scientist, Bioinformatics

San Diego Stealth Startup • San Diego (CA)

On-site
USD 202,000 - 215,000
Backend Engineer for AI-Powered Bio Data Tools
Backend Engineer for AI-Powered Bio Data Tools

Novaflow (YC S25) • San Francisco (CA)

On-site
USD 100,000 - 130,000
Bioinformatics Engineer II: Multi-Omics & Cloud Pipelines
Bioinformatics Engineer II: Multi-Omics & Cloud Pipelines

Stanford University School of Medicine • Stanford (CA)

Hybrid
USD 108,002 - 128,138
Career development programs
Generous time-off
Health care benefits
+2
Senior Bioinformatics Research Engineer — Remote/Hybrid Pipelines
Senior Bioinformatics Research Engineer — Remote/Hybrid Pipelines

Freenome • Brisbane (CA)

Hybrid
USD 162,000 - 227,000
Scientist I, Computational Genomics & Bioinformatics
Scientist I, Computational Genomics & Bioinformatics

Allen Institute • Seattle (WA)

On-site
USD 92,250 - 114,100
Relocation assistance
Work visa sponsorship
Medical, dental, and vision insurance
+2