Bioinformatics Intern - PhD in progress

Mayo Foundation for Medical Education and Research; Rochester (MN); On-site; USD 42,809,000 - 59,931,000; Part time

Job summary

Mayo Clinic in Rochester, MN is seeking a part-time analyst/programmer to develop and apply methods for finding somatic mutations in whole-genome sequencing data at 30X coverage.

Under supervision, you will support moderately complex software systems, contribute to design and maintenance, and document work products for milestones.

Candidates pursuing a PhD in Computer Science or related Informatics field with Python, Unix, and NGS data processing experience are encouraged to apply.

Qualifications

• Pursuing a PhD in Computer Science or related field with GPA 3.0+; Python and Unix experience preferred.
• Experience with processing next-generation sequencing data is preferred.

Responsibilities

• Support moderately complex software-based systems in the assigned area.
• Contribute to design, development, implementation, and maintenance of software systems.

Skills

Python

Unix

NGS data processing

Education

PhD in Computer Science or related Informatics

Job description

Why Mayo Clinic

Mayo Clinic is top-ranked in more specialties than any other care provider according to U.S. News & World Report. As we work together to put the needs of the patient first, we are also dedicated to our employees, investing in competitive compensation and comprehensive benefit plans– to take care of you and your family, now and in the future. And with continuing education and advancement opportunities at every turn, you can build a long, successful career with Mayo Clinic.

Responsibilities

Project description: Developing and applying methodology to find somatic mutation in sequenced human samples. The specific aim is to develop and apply a methodology to find somatic mutation in blood samples with sequenced whole genome at 30X coverage.

Under general supervision and guidance, tasks will include:

• The analyst/programmer is responsible for the support of moderately complex software-based systems in the supported areas.
• Contributes to the design, development, implementation, and maintenance of custom software, or the installation and maintenance of purchased software systems.
• Produces documentation such as systems requirements, designs, and plans as requested by the work unit leadership.
• Work will be reviewed for quality, timeliness, and adequacy at predetermined milestones.

Qualifications

Working towards a PhD in Computer Science or related Informatics field with a GPA of 3.0 or greater. Experience with Python, Unix environment and tools for processing next-generation sequencing data is preferred.

Note: Visa sponsorship is not available for this position.

Exemption Status

Nonexempt

Compensation Detail

This position has a predetermined rate of $29.88 per hour.

Benefits Eligible

No

Schedule

Part Time

Hours/Pay Period

up to 80

Schedule Details

M-F 8 to 12, M-F 1-5, or combination of hours offering flexibility of schedule; Three month appointment with possibility of extension.

Weekend Schedule

N/A

International Assignment

No

Site Description

Just as our reputation has spread beyond our Minnesota roots, so have our locations. Today, our employees are located at our three major campuses in Phoenix/Scottsdale, Arizona, Jacksonville, Florida, Rochester, Minnesota, and at Mayo Clinic Health System campuses throughout Midwestern communities, and at our international locations. Each Mayo Clinic location is a special place where our employees thrive in both their work and personal lives. Learn more about what each unique Mayo Clinic campus has to offer, and where your best fit is.

Equal Opportunity

All qualified applicants will receive consideration for employment without regard to race, color, religion, sex, gender identity, sexual orientation, national origin, protected veteran status or disability status. Learn more about the 'EOE is the Law'. Mayo Clinic participates in E-Verify and may provide the Social Security Administration and, if necessary, the Department of Homeland Security with information from each new employee's Form I-9 to confirm work authorization.