Application Scientist, Bioinformatics

Saphetor SA; Philippines; Remote; PHP 600,000 - 1,200,000; Full time

Job summary

Saphetor SA in the Philippines is seeking an Application Scientist in Bioinformatics to join our commercial team. You will support customers from pre‑sales discussions through onboarding and after‑sales deployment of VarSome across cloud and on‑premises environments.

The role requires translating technical IT and bioinformatics details into clear business value, engaging laboratory professionals and IT staff, and helping shape the product roadmap with field insights.

Qualifications

• Education: A Master’s or PhD in Bioinformatics, Computational Biology, or a related field.
• Expertise: Hands‑on experience in bioinformatics, including NGS secondary and/or tertiary analysis workflows.
• Technical Knowledge: A solid grasp of variant classification frameworks and a deep understanding of bioinformatics and IT workflows.
• Communication: The ability to simplify complex bioinformatics and technical infrastructure concepts for researchers, clinicians, and IT professionals.
• Languages: Proficiency in English is a must. Fluency in other languages (e.g. Mandarin, Japanese or Korean) will be considered as a plus.

Responsibilities

• Pre‑sales Support: Deliver expert demonstrations bridging clinical needs with VarSome, owning the customer evaluation process.
• Post‑sales Support: Lead onboarding sessions for geneticists and bioinformaticians for rapid time to value, coordinating deployments.
• Workflow Optimization & Support: Fine‑tune filtering strategies and automation to maximize platform stickiness and cross‑functional coordination.
• Scientific Advocacy: Gather user feedback to influence the product roadmap and develop technical white papers.
• Cross‑functional Collaboration: Partner with Product, Marketing, and Operations to ensure product‑market fit and growth.

Skills

Bioinformatics

NGS workflows

Communication

Education

Master’s or PhD in Bioinformatics/Computational Biology

Job description

A Little Bit About Us

Saphetor ’s mission is to enable anyone to find, share and use the most comprehensive human genome data – and to collaborate to improve health and lives around the world.To do this we have built the VarSome suite of bioinformatic tools, the world’s leading resource for analysis and interpretation of human genome variant data, with more than 6 000 citations in scientific papers, and over 60 000 registered professional users. Our customers work around the globe across academic, clinical, and industry laboratories analysing NGS (Next Generation Sequencing) data for research and diagnostic purposes. Saphetor is a Swiss precision medicine company with offices in Lausanne (CH), Boston (USA), and Athens (GR) employing a diverse global workforce.

The Opportunity

We are looking for an Application Scientist in Bioinformatics to join our commercial organization.Standing at the intersection of bioinformatics and system operations, you will support our customers through their journey with VarSome, from pre‑sales discussions and platform onboarding to post‑sales support with cloud and on‑premises deployments and finding new opportunities for further growth. You will play a key role in shaping and delivering solutions to our direct and indirect customers. We thrive in a high‑pressure, high‑performance environment where clinical precision and rapid growth meet. While our pace is fast, it is always directed by rigorous organization and clear processes, ensuring that our commitment to quality is never compromised by our drive for speed.

Role Responsibilities

• Pre‑sales Support: Act as the technical “closer” by delivering expert demonstrations that bridge clinical needs with VarSome Premium, Clinical, API; you will own the customer evaluation process, solve “pain points” around variant analysis, and advise on lab equipment/system integrations.
• Post‑sales Support: Lead onboarding sessions for geneticists and bioinformaticians to ensure rapid “time to value”; you will act as the primary lead for on‑premises and private cloud deployments, coordinating infrastructure specifications (storage, network) between clients and our DevOps team.
• Workflow Optimization & Support: Fine‑tune filtering strategies and automation to maximize platform “stickiness” while acting as a high‑level bridge between customer support and stakeholders to ensure seamless routine operations.
• Scientific Advocacy: Systematically gather power‑user feedback to influence the product roadmap and cultivate strategic relationships for conference presentations (e.g. APCHG) and the development of technical white papers.
• Cross‑functional Collaboration: Partner with Product, Marketing, and Operations colleagues to ensure product‑market fit and growth. Work with growth marketers to translate features into benefits for prospects, while influencing the product roadmap through prioritization.

The Ideal Candidate (Profile)

The ideal candidate combines strong bioinformatics expertise and a passion for data analysis with a commercial mindset. You should be able to translate complex technical/IT specifications into clear benefits, while possessing the communication skills necessary to engage both laboratory professionals and DevOps/IT departments.

What you will bring

• Education: A Master’s or PhD in Bioinformatics, Computational Biology, or a related field.
• Expertise: Hands‑on experience in bioinformatics, including NGS secondary and/or tertiary analysis workflows.
• Technical Knowledge: A solid grasp of variant classification frameworks and a deep understanding of bioinformatics and IT workflows.
• Communication: The ability to simplify complex bioinformatics and technical infrastructure concepts for researchers, clinicians, and IT professionals.
• Languages: Proficiency in English is a must. Fluency in other languages (e.g. Mandarin, Japanese or Korean) will be considered as a plus.

Strongly Valued

• Industry Experience: Previous background in a bioinformatics software company or experience in DevOps/SysAdmin roles.
• Regulatory Knowledge: Familiarity with working in regulated environments, such as IVDR, CLIA/CAP, or similar standards.
• Global Mindset: Proven experience in multicultural environments and/or supporting international customers in a scale‑up setting.

Mindset & Key Skills

• Scientific Rigor: A curious, detail‑oriented professional who maintains high scientific standards while managing complex data analysis.
• Commercial Mindset: The ability to balance scientific accuracy with pragmatic sales decisions and translate features into customer benefits.
• Self‑Organization: A structured thinker with strong prioritization and project management skills, comfortable in a fast‑paced environment.
• Global Mobility: Αvailable and willing to undertake international business travel to support our global customer base in the APAC region.

Your career journey with us includes, among others:

• A position in a fascinating healthcare growth domain, at the cutting edge of technology and research
• A competitive compensation package tailored to your unique expertise and professional background.
• A remote work environment that promotes a healthy work‑life balance
• Endless learning opportunities, while transferring new technologies from academics to clinical practice all over the world.

Saphetor is proud to be an Equal Opportunities Employer. We provide equal employment opportunities to all qualified applicants and our employees, regardless of race, color, religion, national origin, age, sex, medical condition or disability, sexual orientation, gender expression, or marital status.