Post Doc: Statistical physics of chromosomes

Vrije Universiteit Amsterdam; Amsterdam; On-site; EUR 41,000 - 64,000; Full time

Job summary

The Vrije Universiteit Amsterdam invites applications for an ERC funded 2-year Post Doc position in its theory group, focusing on the Learn4DChromosome project. The role combines data-driven theory with mechanistic modeling of bacterial chromosome organization, with collaboration across experimental groups and active supervision of students.

We seek a PhD in Physics with strong interests in theoretical or biological physics, and experience in inference/ML tools and programming.

Qualifications

• PhD in Physics is required.
• Background in theoretical, statistical, soft or biological physics preferred.
• Experience with inference and machine learning tools is a plus.

Responsibilities

• Collaborate with experimental groups in a teaching/research environment.
• Supervise students and tutorial classes as part of the teaching program.

Skills

Programming basics

Education

PhD in Physics

Tools

Inference/ML tools

Job description

Our theory group is a worldwide leader in studying the statistical physics of living systems, ranging from chromosomes to migrating cells and multicellular tissues. We aim to understand the emergent functional dynamics and organization of living systems in close collaboration with various experimental labs. We currently have an opening for an ERC funded 2-year Post Doc position.

We are looking for highly motivated applicants with a PhD to strengthen our research team in an interactive and collaborative environment.

ERC funded Project: Learn4DChromosome

The physical organization of bacterial chromosomes is inherently variable, with large conformational fluctuations both from cell to cell and over time. Yet, chromosomes must also be structured to facilitate processes such as transcription, replication, and segregation. In this project, you will combine data-driven theoretical methods with mechanistic models to unravel the dynamic organization of bacterial chromosomes across the cell cycle. You will use approaches grounded in equilibrium and non-equilibrium statistical physics, information theory, and soft condensed matter physics. Your work will be performed in close collaboration with several experimental groups. Finally, you will also play a role in supervising students and the tutorial classes in our teaching program.

Requirements

• PhD Degree in Physics
• preferably with a background in theoretical physics, statistical, soft or biological physics
• experience with using inference/machine learning tools and basic programming is a plus

As a university, we strive for equal opportunities for all, recognising that diversity takes many forms. We believe that diversity in all its complexity is invaluable for the quality of our teaching, research and service. We are always looking for talent with diverse backgrounds and experiences. This also means that we are committed to creating an inclusive community so that we can use diversity as an asset.

We realise that each individual brings a unique set of skills, expertise and mindset. Therefore we are happy to invite anyone who recognises themselves in the profile to apply, even if you do not meet all the requirements.

Conditions of employment

Fixed-term contract: 2 year.

We offer guidance and help so you can develop the skills and experience to become an independent scientist. In addition, we offer an intellectually challenging position in a socially engaged organisation. At VU Amsterdam, you contribute to education, research and service for a better world. And that is valuable. So in return for your efforts, we offer you:

• a competitive salary of minimum € 3.706,00 (Scale 10) and maximum € 5.760,00 (Scale 10) gross per month, on a full-time basis. This is based on UFO profile Researcher 4. The exact salary depends on your education and experience
• the appointment will initially be for 1 year. After a satisfactory evaluation of the initial appointment, the contract will be extended for a total duration of 2 years

We also offer you attractive fringe benefits and arrangements. Some examples:

• a wide range of sports facilities which staff may use at a modest charge
• a full-time 38-hour working week comes with a holiday leave entitlement of 232 hours per year. If you choose to work 40 hours, you have 96 extra holiday leave hours on an annual basis. For part-timers, this is calculated pro rata.
• 8% holiday allowance and 8.3% end-of-year bonus
• contribution to commuting expenses
• discount on (and occasionally exclusive access to) theater performances and courses at the Griffioen Cultural Center

Employer

Vrije Universiteit Amsterdam

The Broedersz group is part if the Section for Physics of Living Systems within the Physics department at the VU Amsterdam, one of the best universities in the Netherlands, and a leading scientific institution in biophysics located in the vibrant and international city of Amsterdam. Our team is an inclusive and diverse environment, welcoming excellent students from all backgrounds. We offer a stimulating and collaborative environment in the physics of life. Phd students and Postdocs in our group have the opportunity to learn from the best scientists in the field, publish in high-impact journals, and present their work at international conferences.

Faculty of Science Researchers and students at VU Amsterdam’s Faculty of Science tackle fundamental and complex scientific problems to help pave the way for a sustainable and healthy future. From forest fires to big data, from obesity to malnutrition, and from molecules to the moon: we cover the full spectrum of the natural sciences. Our teaching and research have a strong experimentally technical, computational and interdisciplinary nature.

We work on new solutions guided by value-driven, interdisciplinary methodologies. We are committed to research, valorisation and training socially engaged citizens of the world who will make valuable contributions to a sustainable, healthy future.

Are you interested in joining the Faculty of Science? You will join undergraduate students, PhD candidates and researchers at the biggest sciences faculty in the Netherlands. You will combine a professional focus with a broad view of the world. We are proud of our collegial working climate, characterised by committed staff, a pragmatic attitude and engagement in the larger whole. The faculty is home to over 11,000 students enrolled in 40 study programmes. It employs over 1,600 professionals spread across 10 academic departments.

Vrije Universiteit Amsterdam stands for values-driven education and research. We are open-minded experts with the ability to think freely. - a broader mind. Maintaining an entrepreneurial perspective and concentrating on diversity, significance and humanity, we work on sustainable solutions with social impact. By joining forces, across the boundaries of disciplines, we work towards a better world for people and planet. Together we create a safe and respectful working and study climate, and an inspiring environment for education and research.

We are located on one physical campus, in the heart of Amsterdam's Zuidas business district, with excellent location and accessibility. Over 5,500 staff work at the VU and over 30,000 students attend academic education.

Diversity

Diversity is the driving force of the VU. The VU wants to be accessible and receptive to diversity in disciplines, cultures, ideas, nationalities, beliefs, preferences and worldviews. We believe that trust, respect, interest and differences lead to new insights and innovation, to sharpness and clarity, to excellence and a broader understanding.

We stand for an inclusive community and believe that diversity and internationalisation contribute to the quality of education, research and our services.

Therefore, we are always searching for people whose backgrounds and experience contribute to the diversity of the VU community.

Learn more about our codes of conduct