Senior Scientist Genomics - Pathogen

Ellison Institute of Technology; Oxford; On-site; GBP 100,000 - 125,000; Full time

Job summary

A leading research institution in Oxford is seeking a Senior Genomics Scientist to develop high-throughput sequencing capabilities. The candidate will lead a team to implement robust workflows and ensure quality control in genomic analysis. A PhD in Genomics is required, with a strong background in NGS technologies and laboratory management. The role offers a competitive salary along with generous benefits in a collaborative environment.

Benefits

Enhanced holiday pay

Private Medical Insurance

Pension

Life Assurance

Income Protection

Qualifications

• 5+ years of postdoctoral or equivalent experience in genomics.
• Experience developing and troubleshooting NGS workflows.
• Strong leadership capabilities in managing laboratory personnel.

Responsibilities

• Design and implement high-throughput sequencing workflows.
• Manage day-to-day operations of the sequencing team.
• Coordinate closely with bioinformatics teams.

Skills

Genomics

Molecular Biology

Laboratory Management

Communication

Education

PhD in Genomics or related field

Tools

Illumina

Oxford Nanopore Technologies

PacBio

Job description

Social network you want to login/join with:

col-narrow-left

Client:

Ellison Institute of Technology

Location:

Oxford, United Kingdom

Job Category:

Other

-

EU work permit required:

Yes

col-narrow-right

Job Reference:

b38932d73df7

Job Views:

10

Posted:

12.08.2025

col-wide

Job Description:

The Ellison Institute of Technology (EIT) tackles humanity’s greatest challenges by turning science and technology into impactful global solutions. Focused on areas like health, food security, sustainable agriculture, climate change, clean energy, and robotics in an era of artificial intelligence. EIT blends groundbreaking research with practical applications to deliver lasting results.

A cornerstone of EIT mission is its upcoming 300,000-square-foot research facility at the Oxford Science Park, set to open in 2027. This cutting-edge campus will feature advanced labs, an oncology and preventative care clinic, and collaborative spaces to strengthen its partnership with the University of Oxford. It will also host the Ellison Scholars, driving innovation for societal benefit.

The Pathogen Mission highlights EIT’s transformative approach, using Whole Genome Sequencing (WGS) and Oracle’s cloud technology to create a global pathogen metagenomics system. This initiative aims to improve diagnostics, provide early epidemic warnings, and guide treatments by profiling antimicrobial resistance. The goal is to deliver certified diagnostic tools for widespread use in labs, hospitals, and public health.

EIT fosters a culture of collaboration, innovation, and resilience, valuing diverse expertise to drive sustainable solutions to humanity’s enduring challenges.

We are seeking a highly skilled and innovative Senior Genomics Scientist to lead the establishment of high-throughput genomics capabilities within our Pathogen Program. This pivotal role will focus on developing and optimising robust sequencing workflows using both short-read (e.g., Illumina) and long-read (e.g., Oxford Nanopore Technologies, PacBio) platforms for the sequencing of pathogens.

The successful candidate will drive the implementation of end-to-end genomics pipelines, from sample preparation through to sequencing and preliminary data analysis, while also supporting method development and scaling through laboratory automation. The scope of work may extend beyond the Pathogen Program, offering opportunities to collaborate across EIT’s broader research initiatives. The position includes line management responsibilities, overseeing a team of 2–3 laboratory scientists, and will play a critical role in advancing EIT’s mission to deliver cutting-edge genomic science for real-world impact.

Requirements

Key Responsibilities:

• Design, evaluate, and implement high-throughput sequencing workflows for pathogen genomics using short- and long-read technologies.
• Develop and optimise novel protocols and methodologies to address emerging research questions and challenges.
• Lead the integration of lab automation systems to streamline sample preparation and sequencing processes.
• Manage day-to-day operations of the sequencing team, including planning, performance tracking, and mentoring of junior scientists.
• Ensure quality control, data integrity, and reproducibility across all stages of the genomics workflow.
• Coordinate closely with bioinformatics teams to facilitate seamless handoff of data for analysis and interpretation.
• Provide scientific leadership and technical insight to support genomics needs across other programs at EIT.
• Keep abreast of technological advances and recommend adoption of relevant new platforms or strategies.

Qualifications & Experience:

Essential Knowledge, Skills and Experience:

• PhD in Genomics, Molecular Biology, Biotechnology, or a related field, or equivalent industrial experience.
• Proven track record (5+ years postdoctoral or equivalent industrial experience) in genomics and sequencing technologies.
• Demonstrated expertise in developing and troubleshooting NGS workflows, including both library prep and sequencing protocols.
• Experience with Illumina, ONT, and/or PacBio platforms.
• Strong leadership capabilities with prior experience managing laboratory personnel and projects.
• Excellent organizational, problem-solving, and communication skills.

Desirable Knowledge, Skills and Experience:

• Experience implementing and operating lab automation platforms (e.g., liquid handlers, robotic systems).
• Proficiency in basic bioinformatics and data analysis, with the ability to build or oversee construction of data processing pipelines.
• Familiarity with quality management systems and standard operating procedures in high-throughput laboratory environments.
• Interest in cross-disciplinary collaboration, including applications of genomics in public health, diagnostics, or basic biology.

We offer the following salary and benefits:

• Salary: Competitive salary on offer
• Enhanced holiday pay
• Pension
• Life Assurance
• Income Protection
• Private Medical Insurance
• Hospital Cash Plan
• Therapy Services
• Electrical Car Scheme

Why work for EIT:

At the Ellison Institute, we believe a collaborative, inclusive team is key to our success. We are building a supportive environment where creative risks are encouraged, and everyone feels heard. Valuing emotional intelligence, empathy, respect, and resilience, we encourage people to be curious and to have a shared commitment to excellence. Join us and make an impact!

Terms of Appointment:

• You must have the right to work permanently in the UK with a willingness to travel as necessary.
• You will live in, or within easy commuting distance of, Oxford.
• During peak periods, some longer hours may be required and some working across multiple time zones due to the global nature of the programme.