AI Lead, Agentic Systems- Biotech R&D

Monte Rosa Therapeutics, Inc; Riehen; On-site; CHF 180,000 - 240,000; Full time

Job summary

Monte Rosa Therapeutics, Inc. seeks a hands-on technical leader to define and build an agentic AI strategy used across discovery through clinical development. You will lead the architecture, identify high-value workflows and transform them into production-ready AI-enabled workflows for scientists.

You will integrate diverse data domains, build data infrastructures, and deploy secure agentic systems with human-in-the-loop oversight, driving adoption through demos and partnerships with scientists.

Qualifications

• PhD in ML/CS/Stats or other quantitative field.
• Substantial experience as an applied ML scientist/engineer with strong execution.
• Proven track record deploying LLM-based or agentic systems in real workflows; not just prototype.
• Deep knowledge of agent architectures: planning, tool calling, RAG, memory, multi-agent coordination, human-in-the-loop design.
• Strong Python and production engineering skills: APIs, testing, containers, cloud deployment, observability; experience with AI data infrastructure like pipelines, ontologies, knowledge graphs, semantic search.
• Depth in at least one scientific data domain (omics, clinical, chemistry, imaging or biomedical text).

Responsibilities

• Own the vision, architecture and roadmap for agentic AI across discovery, translational science, clinical development and commercialization.
• Identify high-value scientific workflows and redesign them around AI agents from first principles.
• Build data and knowledge layers for agents by integrating omics, clinical, chemistry, assay, literature, patent and regulatory data.
• Develop connectors, APIs, semantic and metadata layers, and retrieval systems for reliable data and tools use.
• Deploy secure, auditable agentic systems with human-in-the-loop oversight, tracing, permissioning and monitoring.
• Establish robust evaluation frameworks: benchmarks, provenance checks, failure-mode analysis, reproducibility, latency and cost tracking.
• Collaborate with scientists to turn research needs into products and move prototypes to adopted workflows.
• Drive adoption of agentic-first approaches through demos, partnerships, training and reusable patterns.

Skills

Applied ML engineering

Python programming

Production engineering

API development

Cloud deployment

Knowledge graphs

Semantic search

Education

PhD in ML/CS/Stats

Tools

APIs

Containers

Cloud deployment

Observability

Job description

Overview

Help to define and build Monte Rosa's agentic AI strategy and turn it into production systems that scientists use every day, from discovery through clinical development. This is a hands-on technical leadership role for someone who sees agents as the foundation of how scientific work gets done, not an add-on to existing software.

Responsibilities

• Own the vision, architecture and roadmap for agentic AI across discovery, translational science, clinical development and commercialization.
• Identify high-value scientific workflows and redesign them around AI agents from first principles, not incremental automation.
• Build the data and knowledge layers agents need, integrating omics, clinical, chemistry, assay, literature, patent and regulatory data.
• Develop connectors, APIs, semantic and metadata layers, and retrieval systems (vector, hybrid, knowledge graph) so agents can use internal and external data and tools reliably.
• Deploy secure, auditable agentic systems with human-in-the-loop oversight, tracing, permissioning and monitoring.
• Establish rigorous evaluation frameworks: task benchmarks, factuality and provenance checks, failure-mode analysis, reproducibility, and latency and cost tracking.
• Partner directly with scientists to turn research needs into products, and move quickly from prototype to adopted workflow.
• Drive adoption of agentic-first ways of working through demos, embedded partnerships, training and reusable patterns.
• Track advances in foundation models, multimodal models and agent architectures, and turn them into practical internal capabilities.
• Define outcome-based success measures (cycle-time reduction, decision quality, adoption, reuse), and mentor and grow the AI team as the organization scales.

Qualifications

• PhD in machine learning, computer science, statistics, bioinformatics, physics, engineering or another quantitative discipline. Computational biology training is not required.
• Substantial experience as an applied ML scientist or ML engineer, with a record of original technical thinking and strong execution.
• Proven track record building and deploying LLM-based or agentic systems in real workflows. Prototype-only or prompt-engineering experience is not enough.
• Deep knowledge of agent architectures: planning, tool calling, RAG, structured outputs, memory and context management, multi-agent coordination, and human-in-the-loop design.
• Strong Python and production engineering skills (APIs, testing, containers, cloud deployment, observability), plus experience building AI data infrastructure such as pipelines, ontologies, knowledge graphs and semantic search.
• Depth in at least one scientific data domain (omics, clinical, chemistry, imaging or biomedical text), and the ability to evaluate AI systems scientifically (benchmarks, error analysis, provenance, monitoring) and work with scientists to drive adoption.