Software Graduate Intern, Autonomous Lab

Ginkgobioworks; Emeryville (CA); On-site; USD 45,100 - 63,600; Part time

Benefits offered by this job

Medical, dental & vision coverage

Health spending accounts

Unlimited Paid Time Off

Job summary

Ginkgobioworks in Emeryville, California is seeking a Software Intern to contribute to the development of the first "Total Autonomous Lab." This position involves working with Python to automate lab processes, integrate data, and develop user interfaces for scientists.

Ideal candidates are recent graduates or current students in Computer Science, Bioengineering, or related fields, with a strong enthusiasm for AI-driven experimentation. The salary range for this role is $45,100-$63,600, along with a comprehensive benefits package.

Qualifications

• Recent graduate (BS/MS) or current student.
• Strong proficiency in Python and experience with hardware control.
• Enthusiasm for Lab-in-the-Loop technologies.

Responsibilities

• Develop Python-based protocols for lab automation.
• Assist in developing an LLM-based interface for experiments.
• Work on data pipelines for experimental data.
• Integrate new hardware instruments with software.

Skills

Python proficiency

Hardware control experience

APIs knowledge

Interest in Lab-in-the-Loop technologies

Familiarity with biological data standards

Education

Recent graduate or current student in Computer Science, Bioengineering, or related STEM field

Job description

Our mission is to make biology easier to engineer. Ginkgo is constructing, editing, and redesigning the living world in order to answer the globe’s growing challenges in health, energy, food, materials, and more. Our bioengineers make use of an in-house automated foundry for designing and building new organisms.

About the Role

Ginkgo Bioworks is constructing the world’s first "Total Autonomous Lab"—a facility where scientific work is requested by code and executed by robots, 24/7. We are looking for a Software Intern to help build the digital brain of this lab. You will work with Catalyst, our proprietary software stack that orchestrates fleets of Reconfigurable Automation Cells (RACs). This role is ideal for software engineers who want to apply their skills to physical systems or computational biologists who want to move beyond analysis into autonomous execution.

Responsibilities

• Enable "Protocols as Code": Develop and refine Python-based protocols using the Catalyst Client to control liquid handlers, plate readers, and robotic arms.
• Build the AI Scientist: Assist in the development of Catalyst Agent, our LLM-based interface that allows scientists to launch experiments using natural language.
• Integrate Lab Data: Work on data pipelines that automatically harvest, structure, and upload experimental data from RACs into our data lake for AI model training.
• Develop Device Drivers: Help integrate new hardware instruments into the Catalyst ecosystem, writing the drivers that allow our software to "talk" to new lab tools.

Preferred Qualifications

• Recent graduate (BS/MS) or current student in Computer Science, Bioengineering, or a related STEM field.
• Strong proficiency in Python; experience with hardware control or APIs is a plus.
• Enthusiasm for "Lab-in-the-Loop" technologies where AI models drive physical experimentation.
• Interest in biological data standards and laboratory automation.

The base salary range for this role is $45,100-$63,600. Actual pay within this range will depend on a candidate's skills, expertise, and experience. We also offer a comprehensive benefits package including medical, dental & vision coverage, health spending accounts, voluntary benefits, leave of absence policies, 8 paid holidays in addition to a full-week winter shutdown and unlimited Paid Time Off policy.

It is expected that all Internships are onsite five days a week.

It is the policy of Ginkgo Bioworks to provide equal employment opportunities to all employees, employment applicants, and EOE disability/vet.