Software Engineer II

Genalyte, Inc.; San Diego (CA); On-site; USD 107,000 - 125,000; Full time

Benefits offered by this job

Equity participation

Annual bonus plan

Benefits package

Job summary

Genalyte, Inc. in San Diego, CA is seeking a Software Engineer II to design and develop embedded software powering the Merlin blood-testing platform. You will work on device-to-cloud interfaces and contribute to a medical device software quality program.

The role emphasizes collaboration with leadership, cross‑functional teams, and delivering reliable software for next‑generation diagnostic products, with opportunities for mentoring teammates and advancing in a fast-growing biotech environment.

Qualifications

• Bachelor’s degree in CS, CE, EE or related field.
• Strong analytical and problem‑solving skills.
• Experience with Agile, Scrum, and Waterfall methods.
• Experience with embedded software development and medical device requirements.
• Familiarity with cloud-connected device platforms.
• Excellent communication and teamwork abilities.

Responsibilities

• Developing software components and participating in integration of software components
• Developing software tools to facilitate software test and integration activities
• Developing and executing software test protocols and generating test reports
• Troubleshooting issues related to system functionality and performance
• Contributing to cross‑functional teams
• Mentoring more junior engineers

Skills

Embedded software design

C/C++/C#/Python

Unit testing

Networking fundamentals

Mentoring

Education

Bachelor’s degree in CS/CE/EE or related field

Tools

Jira/Confluence

Job description

About Genalyte

At Genalyte, we’re revolutionizing diagnostic testing to empower a healthier future. Genalyte is a San Diego-based diagnostics company developing the Merlin platform, a novel photonic ring resonator-based system designed to deliver rapid, multiplexed diagnostic results. We believe that timely and accurate health insights shouldn’t be a luxury, but a necessity. We are driven by a vision where advanced diagnostic capabilities are accessible, efficient, and seamlessly integrated into healthcare. Genalyte is more than just a laboratory; we are advocates for health empowerment, dedicated to providing insights that can transform lives and communities.

WHY WORK FOR US

Joining Genalyte at this pivotal pre‑commercial stage means your work will have real, visible impact — on our technology, our culture, and ultimately on how diagnostic testing is delivered to patients. Regardless of your role, you'll be part of a collaborative team working closely with leadership to build something meaningful from the ground up. Genalyte offers competitive compensation including base salary, significant equity participation, and a comprehensive benefits package. This is a rare opportunity to grow alongside a high‑impact company at a genuinely exciting moment in its journey.

Position Summary

We are seeking a highly motivated Software Engineer II to join our dynamic team at a leading biomedical device company. This position will involve designing and developing software systems and tools as part of a team. Focus will be on developing embedded software to power our Merlin blood‑testing product and future product versions, adhering to medical device standards for software quality. The instrument also interfaces with a cloud‑hosted platform for data management and test coordination, so experience with device‑to‑cloud interfaces will be valuable.

Essential Functions & Responsibilities

These may include but are not limited to:

• Developing software components and participating in integration of software components
• Developing software tools to facilitate software test and integration activities
• Developing and executing software test protocols and generating test reports
• Troubleshooting issues related to system functionality and performance
• Contributing to cross‑functional teams
• Mentoring more junior engineers

TECHNICAL KNOWLEDGE

• Familiarity with embedded software system design and concepts
• Experience with one or more programming languages such as C/C++/C#/Python, especially .NET
• Experience with build systems, unit testing and general best practices in SW development
• Proficient knowledge of networking and familiarity with Unix and Windows operating systems
• Competent in use of requirements management and issue tracking systems like Jira/Confluence
• Experience with low‑level controllers and software interfaces to physical components like motors, robots, and sensors

Education, Experience, Knowledge, Skills & Abilities

• Bachelor’s degree in Computer Science, Computer Engineering, Electrical Engineering, or similar field
• Strong analytical and problem‑solving skills
• Excellent communication and teamwork abilities
• Ability to author and present technical documents
• Familiarity with Agile, Scrum, and Waterfall methodologies
• Experience in life sciences industry and medical device development is a strong preference
• Demonstrated ability to work productively in a team environment

Physical Requirements & Work Environment

This is a primarily office‑based role in San Diego, CA. On‑site work is required most days because of the necessary access to physical instruments for development, testing, and troubleshooting. Instruments may be located in hardware or wet lab environments that require personal protective equipment and adherence to related protocols.

Travel Requirements

Travel to customer or partner sites could occur, but is not a normal part of this role and would be rare (<1%).

Compensation

The base salary range for this role is $107,000 - $125,000 per year. Individual pay may vary based on job‑related skills, experience, and relevant education or training. In addition to base salary, this role includes meaningful equity participation, eligibility for the annual target bonus plan, and a comprehensive benefits package (health, dental, vision, and flexible time off policy).

EQUAL EMPLOYMENT OPPORTUNITY

Genalyte, Inc. is an equal opportunity employer. We celebrate diversity and are committed to creating an inclusive environment for all employees. All qualified applicants will receive consideration for employment without regard to race, color, religion, sex, sexual orientation, gender identity, national origin, disability, veteran status, or any other legally protected characteristic.

We may use artificial intelligence (AI) tools to support parts of the hiring process, such as reviewing applications, analyzing resumes, or assessing responses and identifying potential inconsistencies or verification signals in application materials based on available information. These tools assist our recruitment team but do not replace human judgment. Final hiring decisions are ultimately made by humans. If you would like more information about how your data is processed, please contact us.