Senior Director, Quality Control

Stoke Therapeutics; Tennessee; Hybrid; USD 235,000 - 260,000; Full time

Benefits offered by this job

Annual bonus

Equity participation

Medical, dental, vision

401K with company match

Unlimited vacation

Tuition assistance

ESPP

Job summary

Stoke Therapeutics, a Bedford, MA-based biotech, is seeking a Sr. Director of Quality Control to lead analytical lifecycle management and GMP compliance across development stages.

You will drive control strategies, method validation, and external CMOs collaboration while preparing for regulatory submissions and inspections. The role requires 15+ years in QC, deep GMP knowledge, and strong leadership to influence cross-functional teams and healthcare authorities.

Qualifications

• BS/BA, MS or PhD in Analytical Sciences or other relevant discipline.
• 15+ years of progressive experience in QC spanning late-stage development and commercialization.
• Strong knowledge of GMP, data integrity principles and ICH guidelines.
• Expertise in analytical method validation, lifecycle management, and control strategy development.
• Experience with regulatory filing preparation and messaging across global jurisdictions.

Responsibilities

• Align with CMC to lead Stoke’s global QC strategy for all development stages.
• Serve as a QC subject matter expert to senior leadership.
• Maintain phase-appropriate analytical control strategy to support clinical development and regulatory filings.
• Oversee lifecycle management of analytical methods for oligonucleotide products, including transfer, qualification, validation and stability testing.
• Lead QC group for GMP in-process, release, and stability testing; shape long-term QC testing strategy.
• Lead selection and governance of CTLs, ensuring regulatory compliance and effective delivery.
• Collaborate with CMC, QA, Regulatory, and Program Teams to support QC strategies.
• Contribute to regulatory submissions (IND, NDA, IMPD, MAA) with CMC/analytical input.
• Support interactions with Health Authorities and external CTLs/CMOs.
• Provide GMP compliance interpretation, training, and data integrity across QC activities.
• Mature Stoke’s QC infrastructure with scalable processes for GMP-compliant development.
• Drive continuous improvement across Quality Control; support inspection readiness.
• Mentor and develop a small QC team.

Skills

GMP knowledge

Data integrity

Analytical method validation

Lifecycle management

Cross-functional leadership

Regulatory filings

Communication

Conflict resolution

Education

BS/BA, MS or PhD in Analytical Sciences or related discipline

Job description

About Stoke:

Stoke Therapeutics(Nasdaq: STOK), is a biotechnology company dedicated to restoring protein expression by harnessing the body’s potential with RNA medicine. Using Stoke’s proprietary TANGO (Targeted Augmentation of Nuclear Gene Output) approach, Stoke is developing antisense oligonucleotides (ASOs) to selectively restore naturally-occurring protein levels. Stoke’s first medicine in development, zorevunersen, has demonstrated the potential for disease modification in patients with Dravet syndrome and is currently being evaluated in a Phase 3 study. Stoke’s initial focus are diseases of the central nervous system and the eye that are caused by a loss of ~50% of normal protein levels (haploinsufficiency). Proof of concept has been demonstrated in other organs, tissues, and systems, supporting broad potential for Stoke’s proprietary approach. Stoke is headquartered inBedford, Massachusetts. For more information, visit https://www.stoketherapeutics.com/

Position Purpose:

The Sr. Director, Quality Control, will be responsible for providing strategic, scientific, and operational leadership for the QC function at Stoke. This person is accountable for the end-to-end QC strategy, including analytical control and stability strategy, oversight of external QC operations, and regulatory readiness for early clinical development through late-stage development and commercialization. This person is expected to influence Stoke’s quality culture to help reach a sustained state of inspection readiness for all QC related activities. This person will support the development and execution of Stoke’s GMP Quality Management Plan for compliance and risk monitoring for all analytical activities related to Stoke products. This person will be required to contribute to maintaining a fit for purpose and scalable Quality Management System that is always ready for inspection.

The ideal candidate is a seasoned QC leader with expertise in analytical method lifecycle management, can demonstrate the ability to successfully work with CMOs and CTLs, and a proven ability to build scalable, phase appropriate processes in a lean environment. This person must have a strong working knowledge of relevant FDA, EU, ICH GMP guidelines and regulations for phase appropriate application for product development. A demonstrated ability to think outside of the box with a pragmatic risk-based approach for product development and quality management is essential to this role. The candidate should be willing to roll up their sleeves and directly contribute to the implementation of processes, technical aspects of development and resolution of issues as required. This role will report into The VP of Quality and will partner closely with other cross-functional groups such as CMC Analytical Development, CMC Manufacturing, Regulatory and other functions within Quality.

Key Responsibilities:

• Aligned with CMC, establish and lead Stoke’s global QC strategy for all stages of product development.
• Act as a QC subject matter expert and thought partner to senior leadership.
• Establish and maintain a phase appropriate analytical control strategy to support clinical development, global regulatory filings, and commercialization.
• Oversee the lifecycle management of analytical methods for oligonucleotide products, including method transfer, qualification, validation, optimization, stability testing, specification justification and maintenance, shelf-life management, reference standard management and remediation.
• Lead the QC group responsible for routine GMP in-process, release, and stability testing, and establish the long-term quality control testing strategy for clinical and commercial programs.
• Lead selection, governance, and performance management of CTLs, ensuring excellence with respect to technical support, compliance, and consistent delivery.
• Partner with CMC, QA, Regulatory Affairs and Program Teams to ensure QC strategies support overall control strategy.
• Provide leadership and technical input into CMC and analytical sections of regulatory submissions (IND, NDA, IMPD, MAA).
• As a QC and analytical expert, support interactions withHealth Authorities, Stoke Partners and CTLs.
• Provide GMP compliance interpretation, consultation, training, and ensure data integrity for all QC activities.
• Mature Stokes’s QC infrastructure, implementing processes and procedures to support the development of therapeutic candidates in a GMP-compliant manner.
• Drive continuous improvement initiatives across Quality Control.
• Support Stoke’s GMP inspection preparation program and mock PAI inspections at CTLs and CMOs as necessary
• Influence Stoke’s Quality culture
• Lead, mentor, and develop a small team of quality control professionals

Required Skills & Experience:

• BS/BA, MS or PhD in Analytical Sciences or other relevant discipline (i.e., chemistry, biology).
• 15+ years of progressive experience in QC spanning late-stage development and commercialization and with significant leadership responsibility.
• Strong working knowledge of GMP, data integrity principles and ICH guidelines.
• Demonstrated expertise in analytical method validation, lifecycle management, and control strategy development.
• Experience with regulatory filing preparation and messaging across global jurisdictions
• Proven ability to set high standards for performance and accountability, ensuring clarity of expectations and outcomes.
• Effective in conflict resolution/management and negotiation skills.
• Excellent leadership skills with ability to influence, collaborate and communicate effectively in a cross-functional organization.

Location(s):

Stoke is located in Bedford, MA, and will be moving to a new location in Waltham, MA by the end of 2026. This position is a hybrid role with an office setting in Bedford, MA.

Travel:

This position will require approximately 20% travel.

Compensation & Benefits:

At Stoke Therapeutics, we are committed to offering a comprehensive, competitive and thoughtfully designed total rewards program.

The anticipated salary range for this role is $235,000 - $260,000. The final offer will be determined based on a variety of factors, including role scope, experience and qualifications, education, market benchmarks, internal equity, and geographic location. In addition to base salary, Stoke offers an annual bonus and equity participation.

Our benefits package includes medical, dental and vision insurance; life, long- and short-term disability insurance; paid parental leave; a 401K plan with company match, unlimited vacation time, tuition assistance and participation in our Employee Stock Purchase Program (ESPP).

Culture & Values:

At Stoke, we believe that innovation, the ability to successfully advance our ground-breaking science and having fun as a team are enhanced by being together in person, at least periodically. We allow for flexibility in work arrangements that balance individual’s needs and preferences with the needs of our business and our desire to foster a culture of collaboration and innovation.

Our values guide our work to deliver meaningful medicines for people who need them. We are committed to being true to ourselves, to our colleagues, and to the people with severe diseases who are counting on us. We embrace diversity within a unique culture that is defined by our values. Our employee-led Diversity, Inclusion, and Belonging (DIB) Committee underscores the importance of DIB to who we are and what we do.

For more information, visit https://www.stoketherapeutics.com/.

All applicants will receive consideration for employment without regard to race, color, age, religion, sex, sexual orientation, gender identity, national origin, physical or mental disability or protected veteran status.

Stoke participates in E-Verify.