There is 25% travel required for this position (travel expenses are reimbursable).
MUST have PhD in human genetics, genomics, bioinformatics, computational biology, biostatistics, epidemiology, systems biology, or a related field
MUST have minimum 5 years of experience post doctorate
Roles and Responsibilities:
- Provide internal subject matter expertise on how to characterize the factors behind different autism trajectories.
- These include genetics and epigenetics, metabolomics, immune profiling, the microbiome, environmental exposures, family factors, and developmental history.
- The program's starting idea is that nonlinear interactions among these factors shape different developmental, health, communication, and functional outcomes
- Give insight on whether proposed approaches are conceptually and technically sound:
- Study design: cohort design, sample size, and statistical power
- Measurement: assay and measurement choices, and batch effects
- Data handling: combining data from different sources, and quality control
- Analysis: reproducibility, and statistical methods for gene-environment and other multi-factor interactions
- Scope: any justifiable way of measuring a person's biological state is in scope, including neuroimaging and electrophysiology. Characterization is focused on humans, not model systems such as organoids
- Help set goals, expectations, and budgets for TA1 projects, including milestones for generating, harmonizing, and sharing data.
- Help review and oversee funded TA1 projects, including:
- coordinating with TA2 so TA1 data and features can feed the federated, privacy-preserving modeling platforms
- coordinating with TA3 so TA1 findings point to targets that interventions can act on
Requirements:
- Experience in human genetics/genomics or other 'omics research (e.g., sequencing, epigenomics, transcriptomics, proteomics, metabolomics, microbiome), covering both how the data are generated and how they're analyzed
- Experience with computational methods for high-dimensional biological data: bioinformatics, statistical genetics, data science, computational modeling, and/or machine learning
- Experience working with large human cohort or long-term datasets that combine several data types
- Experience with budgeting and program or project management
Preferred Experience:
- Minimum five years of experience post-doc.
- Genetics or biology research on autism or other neurodevelopmental conditions
- Familiarity with large autism and population datasets (e.g., SPARK, Simons Simplex Collection, MSSNG, ABCD, All of Us)
- Environmental epidemiology or exposome science; immunology; metabolism; gut-brain or microbiome research
- Methods for causal inference and interactions (e.g., Mendelian randomization, gene-by-environment modeling, polygenic scores, multi-omic integration, subtyping or clustering patients by trajectory)
- Neuroimaging or EEG analysis
- Data standards, governance, and privacy for genomic data, including FAIR principles, GA4GH standards, consent, and assent for minors, and returning results to participants
- Engaging communities in genetic research, and awareness of autistic community perspectives on it
- Lived experience of autism is a plus. Disclosure is voluntary and not required.
- PhD (or MD/PhD) in human genetics, genomics, bioinformatics, computational biology, biostatistics, epidemiology, systems biology, or a related field.
- A master’s degree with substantial relevant research experience may be considered