Remote Bioinformatics Pipeline Engineer (NGS & Cloud)

OMG Technology; United States; Teletrabalho; USD 120 000 - 180 000; Tempo integral

Resumo da oferta

OMG Technology seeks a Bioinformatics Pipeline Engineer to join our Bioinformatics Solutions Engineering group. The role focuses on end-to-end design, development, validation, and deployment of diagnostic-grade software and pipelines for NGS data in a regulated CAP/CLIA environment.

The candidate will collaborate with software developers, bench scientists, and clinical specialists to deliver robust, scalable pipelines and high-quality tests for patients.

Qualificações

• 5+ years of experience with a Bachelor’s degree or 2+ years with a Master’s in clinical/biological data or equivalent.
• Experience with Bioinformatic methods, database development, query/scripting/programming languages, Cloud development, Agile methodology, DevOps and other data analysis tools.

Responsabilidades

• Develop, validate, and implement new software applications, databases, processes, and interfaces related to NGS data analysis, diagnostic testing development and validation, data quality review, clinical reporting.
• Serve as an SME on systems/workflows supporting advanced development and high-tier production support.
• Participate in resolving support requests and regularly report progress with data analyses for internal review.
• Prepare reports and communications of technical activities related to product/process development and improvement.
• Collaborate with Software Developers, R&D bench scientists, genetic counselors, operations scientists, and other technical partners.

Conhecimentos

Bioinformatics

Nextflow

Cloud computing

DevOps

Python

JavaScript/TypeScript

R

Docker

REST APIs

Git

CI/CD

AI development tools

Formação académica

Bachelor’s degree

Master’s degree

Ferramentas

DRAGEN

BWA

VEP

FastQC

MultiQC

samtools

bedtools

Docker

Nextflow

Cromwell

CWL

AWS

Terraform

AWS CDK

Git

GitHub CI/CD

Descrição da oferta de emprego

OMG Technology seeks a Bioinformatics Pipeline Engineer to join our Bioinformatics Solutions Engineering group. The role focuses on end-to-end design, development, validation, and deployment of diagnostic-grade software and pipelines for NGS data in a regulated CAP/CLIA environment.

The candidate will collaborate with software developers, bench scientists, and clinical specialists to deliver robust, scalable pipelines and high-quality tests for patients.