Machine Learning Engineer

UCSF Health, AG; San Francisco (CA); Hybrid; USD 140,000 - 190,000; Full time

Job summary

UCSF is seeking a Machine Learning and Data Engineer to lead data pipelines and infrastructure for deploying ML/AI tools within the AER team. The role emphasizes collaboration with UCSF technical teams and productionizing models in HIPAC infrastructure.

Ideal candidates have 6+ years in AI/ML engineering, strong Python/SQL, and cloud experience. Epic Clarity/Caboodle knowledge is a plus; flexibility includes on-site meetings and lab collaboration.

Qualifications

• Bachelor's degree or equivalent experience in CS/EE or related field.
• 6+ years designing and maintaining AI/ML applications with increasing responsibility.
• Experience with data analysis and ML tools such as Jupyter, Pandas, scikit-learn, NumPy/Scipy, PyTorch.
• Strong Python and SQL skills; production-grade code and scale-focused mindset.
• Experience deploying and monitoring AI/ML models and pipelines; MLOps/CI-CD familiarity.
• Knowledge of cloud platforms (AWS, GCP, Azure) and data warehousing concepts.
• Familiarity with Epic data structures (Clarity/Caboodle) preferred.

Responsibilities

• Lead development, implementation, and maintenance of data pipelines for ML/AI deployments.
• Collaborate with UCSF teams to productionize AI/ML tools within HIPAC and AER.
• Design metrics to monitor AI/ML tools deployed in UCSF Health environments.
• Communicate technical concepts to both technical and non-technical stakeholders.

Skills

Python

SQL

ML pipelines

CI/CD

MLOps

Epic Clarity

Cloud platforms

Data warehousing

Communication

Teamwork

Education

Bachelor's degree or equivalent experience

Tools

Jupyter

Pandas

scikit-learn

NumPy

PyTorch

Job description

Job Description

This is a grant funded, 18 month, Limited Appointment position.

Certain terms and conditions of employment for this position, including the rate of pay, benefits, etc., are currently subject to negotiation with the appropriate union.

This position is considered flexible, 2 days on-site, and must be available for lab on-site meetings that may happen once per week or bi-weekly, based on needs of the department.

The Machine Learning and Data engineer role will lead the development, implementation, and maintenance of data pipelines and infrastructure to support the deployment and continuous monitoring of Machine Learning (ML) and generative Artificial Intelligence (AI) tools within UCSF's APeX Enabled Research (AER) team. Most projects will be in partnership with other UCSF technical teams and involve highly customized research solutions. Communication skills and inventive technical solutioning are crucial.

The AER team provides a large array of services to the UCSF Research community, including project consultation, grant support, budget estimations, and project implementation and support. Project examples include:

• Development of EHR-based interventions via clinical trials embedded within healthcare delivery systems to generate scientific evidence while delivering healthcare.

  • Enabling UCSF researchers with algorithms, digital tools and / or clinical interventions with strong evidence of feasibility and acceptability.
  • Develop technical approaches and budgets in order to implement these tools within the electronic medical record.
  • Supporting the development of scalable, low cost infrastructure to enable ongoing research.

This role primarily involves managing and optimizing the data and monitoring pipelines of the Health IT Platform for Advanced Computing (HIPAC), a cloud infrastructure that supports the development and deployment of AI/ML tools, including large language models (LLMs) in the EHR. Specifically, the ML/data engineer will work on implementing new data integrations, enhancing HIPAC's ETL functionalities, productionizing AI/ML tools developed by UCSF data scientists/researchers, and designing and implementing metrics to continuously monitor AI/ML tools deployed at UCSF Health.

Competitive applicants for this position are software, machine learning, or data engineers with 6+ years of experience in implementing and maintaining AI/ML pipelines. Proficiency in MLOps, Python, SQL, and CI/CD is required. This role also requires a deep understanding of Epic data models (Clarity and Caboodle). Successful candidates either have or are able to obtain Epic Clinical/Clarity data model certification shortly after onboarding.

Department Overview

The University of California, San Francisco (UCSF) Department of Information Technology Academic Research Systems (ARS) group is chartered to provide data services and infrastructure that support the UCSF Research Community's computing and analytic requirements through centralized informatics services in the areas of Data, Tools, Secure Compute Environments, and Consulting Services.

Qualifications

REQUIRED QUALIFICATIONS

• Bachelor's degree in Computer Science, Computer Engineering, or related area and / or equivalent experience / training.
• 6 years of experience in positions of increasing responsibility designing, implementing, and maintaining complex AI/ML applications.
• Experience with data analysis and machine learning tools such as Jupyter, Pandas, scikit-learn, Numpy/Scipy, PyTorch, etc.
• Demonstrated advanced knowledge of full software development lifecycle
• Advanced experience with Python; ability to write clean, efficient, and production-level Python code
• Advanced experience with SQL (e.g., SQLServer, PostgreSQL)
• Demonstrated experience deploying, monitoring, and maintaining AI/ML models and pipelines
• Advanced experience in database systems, data warehousing solutions, and understanding of ETL pipelines
• Advanced experience in designing, building, or maintaining data infrastructure for efficient ML model training and inference.
• Demonstrated experience working with MLOps, DevOps, and CI/CD pipeline toolsets
• Experience in developing complex, automated testing
• Experience with cloud-based architecture in platforms such as AWS, GCP, Azure
• Demonstrated effective communication and interpersonal skills
• Demonstrated ability to communicate technical information to technical and non-technical personnel at various levels in the organization
• Self-motivated and works independently and as part of a team. Able to learn effectively and meet deadlines
• Demonstrated broad problem-solving skills
• Demonstrated ability to interface with management on a regular basis
• Excellent project leadership and management skills

PREFERRED QUALIFICATIONS

• Master's Degree or PhD in Computer Science, Computer Engineering, or related area and / or equivalent experience / training.
• Experience with large language models and other generative AI technologies, especially supporting the deployment of GenAI-based tools in a production environment
• Familiar with data visualization tools (e.g., Tableau)
• Experience with Epic data structures
• Epic Clarity Certification
• Cloud Development certifications

About UCSF

The University of California, San Francisco (UCSF) is a leading university dedicated to promoting health worldwide through advanced biomedical research, graduate-level education in the life sciences and health professions, and excellence in patient care. It is the only campus in the 10-campus UC system dedicated exclusively to the health sciences. We bring together the world's leading experts in nearly every area of health. We are home to five Nobel laureates who have advanced the understanding of cancer, neurodegenerative diseases, aging and stem cells.

Pride Values

UCSF is a diverse community made of people with many skills and talents. We seek candidates whose work experience or community service has prepared them to contribute to our commitment to professionalism, respect, integrity, diversity and excellence - also known as https://www.ucsf.edu/about/mission-and-values . In addition to , UCSF is committed to equity - both in how we deliver care as well as our workforce. We are committed to building a broadly diverse community, nurturing a culture that is welcoming and supportive, and engaging diverse ideas for the provision of culturally competent education, discovery, and patient care. Additional information about UCSF is available https://diversity.ucsf.edu/ . Join us to find a rewarding career contributing to improving healthcare worldwide.

EEO Statement

The University of California is an Equal Opportunity Employer. All qualified applicants will receive consideration for employment without regard to race, color, religion, sex, sexual orientation, gender identity, national origin, disability, age, protected veteran status, or other protected status under state or federal law.