GeneDx Software Engineer - Lab Informatics

GeneDx, Inc; Gaithersburg (MD); On-site; USD 80,000 - 100,000; Full time

Benefits offered by this job

Paid Time Off

Health, dental, vision insurance

401(k) retirement savings plan with a company match

Job summary

GeneDx, Inc is seeking a Software Engineer – Lab Informatics in Gaithersburg, Maryland. This role involves developing genomic laboratory informatics applications to manage and analyze clinical sequencing data. Candidates should have strong proficiency in Python and experience in software development.

The position offers a dynamic work environment with benefits including health insurance and a 401(k) retirement savings plan. Commitment to advancing genetic testing aligns with our mission.

Qualifications

• MS in computer science or a related field with at least 2 years of professional software development experience.
• Demonstrated proficiency in Python or another major scripting language.
• Experience with relational databases (Microsoft SQL, MySQL, Postgres).

Responsibilities

• Develop and modify existing applications and systems.
• Conduct system and unit testing.
• Provide user and technical support for lab informatics systems.

Skills

Python or another major scripting language

Linux command‑line proficiency

Version control systems (Git, SVN)

Relational databases (SQL, MySQL, Postgres)

Ability to work independently and in a team

Communication skills

Education

MS in computer science or related field

BS in computer science or related field with experience

Tools

Docker

JIRA

Job description

GeneDx Software Engineer – Lab Informatics

GeneDx is a rapidly growing CAP and CLIA certified diagnostic genetic testing laboratory for molecular genetics. We apply cutting‑edge technologies to provide a wide array of molecular genetic diagnostic tests, including whole‑exome sequencing and next‑generation sequencing panels. Our mission is to make clinical diagnostic testing available for people with genetic conditions and their families.

Role

The GeneDx Software Engineer – Lab Informatics works on the production genomic laboratory informatics team developing and utilizing programs for the collection, storage, management, analysis, and reporting of clinical sequencing data.

Responsibilities

• Develop new and modify existing applications and systems, including translating laboratory requirements into technical specifications for development and supporting existing legacy systems
• Develop software and user interfaces for laboratory applications
• Update existing laboratory applications
• Translate laboratory requirements into technical specifications for development
• Conduct system and unit testing
• Provide user and technical support for lab informatics systems
• Create detailed technical documentation for software and testing

Qualifications

• MS in computer science or a related field with at least 2 years of professional software development experience OR BS in computer science, molecular biology, genetics, or a related field with at least 4 years of professional software development experience
• Demonstrated proficiency in Python or another major scripting language (Ruby, Perl)
• Demonstrated Linux command‑line proficiency including Bash/Shell scripting
• Experience with Git, SVN, or other version control systems
• Experience with relational databases (Microsoft SQL, MySQL, Postgres)
• Experience working in Windows, Linux, and HPC (SGE/Slurm) environments
• Strong verbal and written communication skills
• Demonstrated ability to work both independently and in a development team

Preferred Qualifications

• 2+ years CLIA/CAP/NY State/FDA laboratory informatics experience
• Experience with genomic or next‑generation sequencing data and laboratory processes
• Experience with automated testing and continuous deployment
• Experience with software project management systems or concepts (JIRA, Kanban, etc.)
• Knowledge of web application concepts (MVC, jQuery, etc.)
• Experience with Docker
• Experience with VBA
• Experience creating and maintaining software documentation in a regulatory environment

Benefits

• Paid Time Off (vacation, sick, personal, holiday, jury duty, bereavement leave)
• Health, dental, vision, life insurance, long‑term and short‑term disability plans
• Flexible Spending Account (FSA)
• Health Savings Account (HSA)
• 401(k) retirement savings plan with a 4% company match and immediate vesting
• Tuition Assistance
• Employee Discounts (cell phone service, movie tickets, etc.)
• Many promotions from within
• Business casual, dog‑friendly work environment

EEO Statement

All your information will be kept confidential according to EEO guidelines.