Bioinformation B

Opportunity for Health; Philadelphia, Northern (Philadelphia County, KY); Hybrid; USD 67,000 - 102,000; Full time

Benefits offered by this job

Health benefits

Tuition assistance

Retirement plans

Flexible work hours

Job summary

The University of Pennsylvania in Philadelphia is seeking a Bioinformatician to lead analysis of single-cell RNA-seq, multi-omics data, and large clinical datasets in cancer research. You will develop pipelines and collaborate with Penn Medicine investigators to report analytic findings.

Ideal candidates have a Master of Science with 3–5 years in bioinformatics/data analysis, strong R/Python skills, and experience in Linux environments.

Qualifications

• Master of Science and 3–5 years of data analysis in bioinformatics or related fields.
• Experience in Linux, R/Python, and bash scripting; ability to work with multi-disciplinary teams.
• Experience with single-cell sequencing and NGS data is a plus.

Responsibilities

• Analyze single-cell and multi-omics data and large clinical datasets.
• Develop data analysis pipelines and bioinformatics applications.
• Collaborate with Penn Medicine investigators and report analytic findings.

Skills

Bioinformatics

Biostatistics

Epidemiology

Genetic Epidemiology

Computer Science

Data Science

Informatics

NGS data analysis

Single cell sequencing

Education

Master of Science in Bioinformatics or related field

Tools

Linux

R

Python

Bash

Perl

C/C++

SQL

SAS

Stata

Job description

## Bioinformation BApplylocations: HUPtime type: Full timeposted on: Posted 5 Days Agojob requisition id: JR00117282**University Overview**The University of Pennsylvania, the largest private employer in Philadelphia, is a world-renowned leader in education, research, and innovation. This historic, Ivy League school consistently ranks among the top 10 universities in the annual U.S. News & World Report survey. Penn has 12 highly-regarded schools that provide opportunities for undergraduate, graduate and continuing education, all influenced by Penn’s distinctive interdisciplinary approach to scholarship and learning. As an employer Penn has been ranked nationally on many occasions with the most recent award from Forbes who named Penn one of America’s Best Large Employers in 2023.Penn offers a unique working environment within the city of Philadelphia. The University is situated on a beautiful urban campus, with easy access to a range of educational, cultural, and recreational activities. With its historical significance and landmarks, lively cultural offerings, and wide variety of atmospheres, Philadelphia is the perfect place to call home for work and play.The University offers a competitive benefits package that includes excellent healthcare and tuition benefits for employees and their families, generous retirement benefits, a wide variety of professional development opportunities, supportive work and family benefits, a wealth of health and wellness programs and resources, and much more.**Posted Job Title**Bioinformation B**Job Profile Title**Bioinformatician B**Job Description Summary**The Nathanson laboratory is hiring a bioinformatician/programmer with expertise in statistical analysis to participate in on-going research in large-scale genomics and transcriptomics projects in the inherited and somatic genetics of cancer. This position seeks individuals to work semi-independently, providing bioinformatics support to investigators; managing and working in collaborative groups, locally, nationally and internationally.**Job Description**The Bioinformation B focuses on the analysis of single cell data analysis, highly multiplex immunohistochemistry data, RNA and DNA sequencing data sets, and multi ‘omics analyses, along with large clinical datasets. If interested, the individual also will have the opportunity to work on analyzing genome-wide genotyping and next-generation sequencing data from large data sets (e.g. UK Biobank); constructing data analysis pipelines; developing bioinformatics applications; and working with investigators to report and publish analytic findings from studies. We collaborate with multiple Penn groups and colleagues in major national and international research institutions to identify genomic risk factors for cancer and related phenotypes in large cohorts, case-control studies, family studies, and biobanks. Furthermore, the lab benefits from close collaborations with other analysts across Penn Medicine. This position offers opportunities for career development, including the development of independent projects, participation in and presentation at national and international meetings, and manuscript preparation and publication.**Qualifications*** Master of Science and 3 to 5 years of data analysis experience or equivalent combination of education and in the areas of Bioinformatics, Biostatistics, Epidemiology, Genetic Epidemiology, Computer Science, Data Science, Informatics or similar fields experience or equivalent combination of education and experience is required.* Experience working in a Linux environment.* Competence in R/Python programming languages and bash scripting; and* The ability to work with a multi-disciplinary team and communicate effectively with team members.* Additional requirements include ability to work independently and apply critical thinking and sound judgment and excellent organizational and time management skills.* Additional experience in other languages like Perl, C/C++, and SQL, statistical analysis software like SAS and Stata, and various development environments is highly desired.* Prior experience with single cell sequencing and NGS data a plus.This position is contingent upon grant funding.**Job Location - City, State**Philadelphia, Pennsylvania**Department / School**Perelman School of Medicine**Pay Range**$67,155.00 - $101,500.00 Annual RateSalary offers are made based on the candidate’s qualifications, experience, skills, and education as they directly relate to the requirements of the position, and in alignment with salary ranges based on external market data for the job’s level. Internal organization and peer data at Penn are also considered.**Equal Opportunity Statement**The University of Pennsylvania is an equal opportunity employer. Candidates are considered for employment without regard to race, color, sex, sexual orientation, religion, creed, national origin (including shared ancestry or ethnic characteristics), citizenship status, age, disability, veteran status or any class protected under applicable federal, state or local law.**Special Requirements** Background checks may be required after a conditional job offer is made. Consideration of the background check will be tailored to the requirements of the job.**University Benefits*** **Health, Life, and Flexible Spending Accounts**: Penn offers comprehensive medical, prescription, behavioral health, dental, vision, and life insurance benefits to protect you and your family’s health and welfare. You can also use flexible spending accounts to pay for eligible health care and dependent care expenses with pre-tax dollars.* **Tuition**: Take advantage of Penn's exceptional tuition benefits. You, your spouse, and your dependent children can get tuition assistance here at Penn. Your dependent children are also eligible for tuition assistance at other institutions.* **Retirement:** Penn offers generous retirement plans to help you save for your future. Penn’s Basic, Matching, and Supplemental retirement plans allow you to save for retirement on a pre-tax or Roth basis. Choose from a wide variety of investment options through TIAA and Vanguard.* **Time Away from Work:** Penn provides you with a substantial amount of time away from work during the course of the year. This allows you to relax, take vacations, attend to personal affairs, recover from illness or injury, spend time with family—whatever your personal needs may be.* **Long-Term Care Insurance:** In partnership with Genworth Financial, Penn offers faculty and staff (and your eligible family members) long-term care insurance to help you cover some of the costs of long-term care services received at home, in the community or in a nursing facility. If you apply when you’re newly hired, you won’t have to provide proof of good health or be subject to underwriting requirements. Eligible family members must always provide proof of good health and are subject to underwriting.* **Wellness and Work-life Resources**: Penn is committed to supporting our faculty and staff as they balance the competing demands of work and personal life. That’s why we offer a wide variety of programs and resources to help you care for your health, your family, and your work-life balance.* **Professional and Personal Development:** Penn provides an array of resources to help you advance yourself personally and professionally.* **University Resources:** As a member of the Penn community, you have access to a wide range of University resources as well as cultural and recreational activities. Take advantage of the University’s libraries and athletic facilities, or visit our arboretum and art galleries. There’s always something going on at Penn, whether it’s a new exhibit at the Penn Museum, the latest music or theater presentation at the Annenberg Center, or the Penn Relays at Franklin Field to name just a few examples. As a member of the Penn community, you’re right in the middle of the excitement—and you and your family can enjoy many of these activities for free.* **Discounts and Special Services**: From arts and entertainment to transportation and mortgages, you'll find great deals for University faculty and staff. Not only do Penn arts and cultural centers and museums offer free and discounted admission and memberships to faculty and staff. You can also enjoy substantial savings on other goods and services such as new cars from Ford and General Motors, cellular phone service plans, movie tickets, and admission to theme parks.* **Flexible Work Hours:** Flexible work options offer creative approaches for completing work while promoting balance between work and personal commitments. These approaches involve use of non-traditional work hours, locations, and/or job structures.* **Penn Home Ownership Services:** Penn offers a forgivable loan for eligible employees interested in buying a home or currently residing in West Philadelphia, which can be used for closing costs or home improvements.* **Adoption Assistance:** Penn will reimburse eligible employees on qualified expenses in connection with the legal adoption of an eligible child, such as travel or court fees, for up to two adoptions in your household.