Bioinformaticist

Lynker; Miami (FL); On-site; USD 90,000 - 130,000; Full time

Benefits offered by this job

Comprehensive healthcare for employee

401(k) retirement plan with company-mт

Employee Stock Ownership Plan (ESOP)

Paid holidays and Personal Time Off

Tuition assistance

Flexible spending accounts

Employee assistance program

Life and disability insurance

Career growth plans

Job summary

Lynker is seeking a Bioinformaticist to support NOAA SEFSC MMTD with bioinformatics research, genomic data analysis, molecular technique development, data visualization, reporting, and collaboration across NMFS programs.

The role emphasizes teamwork with SEFSC and NMFS, development of analytical pipelines, and dissemination of findings through peer-reviewed publications. Travel and fieldwork are possible.

Qualifications

• MS degree or higher in Marine Science, Biology, Oceanography, Ecology, Statistics, or a related field; or BS with five years of relevant experience.
• Ability to go to sea, generally for less than one week.
• Ability to lead a small team.
• Bioinformatics expertise.
• Ability to present and publish to peer-review audiences and journals.
• Experience with Next-Generation Sequencing data analysis, including RNA-seq, exome-seq, WGS, and methylation analysis.
• Strong knowledge of R/Bioconductor, Python, and other programming languages used in data science and bioinformatics.
• Experience with data visualization tools/libraries such as ggplot, heatmaps, or dimension reduction techniques.
• Proficiency in scripting languages, including Python and R.
• Knowledge of software engineering best practices.
• Working knowledge of marine mammal or marine science research activities.

Responsibilities

• Conduct and support research to improve laboratory and data analysis techniques for marine species.
• Support research that enhances fishery management and conservation of marine organisms.
• Develop and refine molecular techniques for marine and anadromous species.
• Collaborate on laboratory, field, and statistical projects; contribute to molecular technique research (eDNA).
• Analyze genomic datasets and lead analysis development for new tools.
• Use statistical and computational approaches to influence fisheries management decisions.
• Maintain robust data management planning and compliance with access requirements.
• Coordinate with program manager to identify research priorities and deliver data efficiently.

Skills

Bioinformatics expertise

NGS data analysis

R/Bioconductor

Python

Data visualization

Scripting (Python/R)

Software engineering

Marine science knowledge

Publish to peer-reviewed journals

Education

MS degree or higher in Marine Science, Biology, Oceanography, Ecology, Statistics, or related field

BS degree plus 5 years of relevant experience

Job description

Bioinformaticist

Lynker Corporation is seeking a Bioinformaticist to support NOAA Fisheries’ Southeast Fisheries Science Center (SEFSC), Marine Mammal and Turtle Division (MMTD). This proposed role will conduct and support bioinformatics research, genomic data analysis, molecular technique development, data visualization, reporting, and collaboration across SEFSC and NMFS research programs.

Hiring for this position will be contingent on contract award.

Overview

SEFSC MMTD conducts bioinformatic studies to analyze complex genomics datasets for multiple taxa to understand population structure and dynamics driven by evolutionary, ecological, and environmental changes. The work supports marine mammal and turtle science, fisheries management, conservation of anadromous and marine organisms, and participation in an NMFS Omics network of bioinformaticists and Omics specialists.

Responsibilities

• Conduct and support research to improve laboratory and data analysis techniques that help understand distribution and abundance of marine and anadromous species.
• Support research that improves fishery management and conservation of anadromous and marine organisms at SEFSC within MMTD and across multiple divisions.
• Perform research developing, refining, and using molecular techniques to investigate marine and anadromous species.
• Participate in laboratory, field, and statistical projects and contribute substantively to research on molecular techniques for fisheries management, including eDNA.
• Analyze existing and future genomic datasets and facilitate project lead analysis, including development and testing of tools as needed.
• Conduct data analysis that may include RADseq analysis, WGS to variant calling, population genomics, landscape genetic analysis, source-sink dynamics, CKMR, metabarcoding bioinformatics analysis in marine fish and mammal species, and eDNA data analysis.
• Use statistical and computational approaches to assess data and results that influence fisheries management and conservation of marine and anadromous taxa.
• Continue development of robust data management planning and execution to meet Public Access to Research Results Act requirements.
• Work closely with the program manager to identify research priorities and conduct project management to ensure data is delivered efficiently and accurately.
• Construct deadlines and ensure deadlines are met or adjusted accordingly.
• Manage laboratory approaches, including assisting with purchasing and inventory and training new employees.
• Occasionally participate in collection and analysis of data on anadromous or marine organisms.
• Establish and nurture effective partnerships with internal and external scientists and resource managers from NOAA offices, Federal and State agencies, academic institutions, and international institutions.
• Collaborate with internal and external groups to share information and meet common objectives.
• Prepare management reports, information products, and presentations for general and technical audiences.
• Participate in publishing research in scientific journals as lead or co-author.
• Assist with reports, papers, presentations, or briefs on marine or fisheries-related information.
• Attend planning and coordination meetings with MMTD researchers, either virtually or in person.

Qualifications

• MS degree or higher in Marine Science, Biology, Oceanography, Ecology, Statistics, or a related field of study; or BS degree in Marine Science or a related field of study plus five years of relevant experience.
• Ability to go to sea, generally for less than one week.
• Ability to lead a small team.
• Bioinformatics expertise.
• Ability to present and publish to peer-review audiences and journals.
• Experience with Next-Generation Sequencing data analysis, including RNA-seq, exome-seq, whole-genome and targeted sequencing, and methylation analysis.
• Strong knowledge of R/Bioconductor, Python, and other programming languages used in data science and bioinformatics.
• Experience with data visualization tools/libraries such as ggplot, heatmaps, or dimension reduction techniques.
• Proficiency in scripting languages, including Python and R.
• Knowledge of software engineering best practices.
• Working knowledge of marine mammal or marine science research activities.

Work Environment

This task will be based at a SEFSC laboratory in Miami, FL; Beaufort, NC; or Pascagoula, MS. The role may require the ability to go to sea, generally for less than one week. Facility access is from 6 a.m. to 6 p.m., Monday through Friday, for tasks requiring facility access. Work shall be performed during normal facility operating hours, five days per week, not to exceed 40 hours per week except when overtime is approved in advance.

Travel is anticipated and authorized for this task order, subject to COR approval prior to travel. Travel may include fieldwork to collect biological and environmental data from different surveys and/or platforms, including aerial, ship, or unmanned systems; fieldwork in support of MMTD marine mammal and turtle research and outreach; and participation in meetings, workshops, conferences, and prescribed training.

Benefits

• Comprehensive healthcare for the employee at no monthly cost
• Healthcare benefit covers medical, prescription drug, dental, and vision
• Personal Time Off (PTO) Policy plus paid holidays
• Highly competitive compensation plan regularly calibrated against industry and location benchmarks
• 401(k) retirement plan with company-matching
• Employee Stock Ownership Plan (ESOP) - we’re all company owners!
• Flexible spending accounts
• Employee assistance program (EAP)
• Short- and long-term disability insurance
• Life and accident insurance
• Tuition assistance/Training/Workforce improvement reimbursement per year
• Spot bonuses for exceptional performanceAnnual Employee Recognition Awards with bonuses
• Employee Referral Program
• Free centralized, self-directed Learning Management System to learn at your own pace
• Personalized career growth plans for every employee

Lynker is an E-Verify employer.

Lynker is an equal opportunity employer and makes all employment decisions based on merit, qualifications, and business needs. We do not discriminate on the basis of race, color, religion, sex (including pregnancy, sexual orientation, or gender identity), national origin, age, disability, genetic information, marital status, veteran status, or any other legally protected status under federal, state, or local laws.