Advisor – Engineering – Drug Substance

Eli Lilly and Company

Indianapolis (IN)

On-site

USD 129,000 - 209,000

Full time

7 hours ago
Be an early applicant
Application generator

Don’t send a generic resume — generate a resume and cover letter tailored to this exact role.

Get past ATS filters

Benefits offered by this job

Company bonus
Comprehensive benefits
401(k) and pension

Job summary

Lilly in Indianapolis is seeking engineers to join the process design and development team to advance scalable, compliant manufacturing processes for small molecules, oligonucleotides, and peptides. You will collaborate with chemists and formulation scientists to drive technical solutions and continuous improvement across the development spectrum.

Ideal candidates hold a PhD or MSc/BSc with extensive process development experience, demonstrated leadership, and a collaborative mindset in a

Qualifications

  • PhD or MSc/BSc with extensive chemical/pharmaceutical process development experience.
  • Experience designing, developing, and optimizing synthetic process manufacturing unit operations.
  • Strong modeling/simulation and data analytics skills; familiarity with PAT systems.

Responsibilities

  • Apply engineering fundamentals to design and optimize chemical processes for small molecules, oligonucleotides, and peptides.
  • Design and execute lab experiments using reaction kinetics, heat/mass transfer, and process modeling.
  • Drive scale-up and technology transfer to manufacturing sites with cross-functional teams.
  • Ensure compliance with regulations, SOPs, and safety procedures in drug R&D.

Skills

Process design
Scale-up development
Cross-functional leadership
Analytical thinking
Chemical engineering knowledge

Education

PhD in Chemical Engineering
MSc in Chemical Engineering +7 years of process development experience
BSc in Chemical Engineering +10 years of process development experience

Tools

Modeling and simulation tools
Process Analytical Technology (PAT) systems

Job description

At Lilly, the work is demanding because patients are waiting. We unite caring with discovery to help make life better for people around the world, knowing that every decision, every detail, and every day matters. Headquartered in Indianapolis, Indiana, our over 50,000 employees around the globe take on complex challenges to discover and deliver life-changing medicines, strengthen how health is understood and managed, and support the communities we serve. This is hard, urgent, selfless work—but it’s work worth doing. If you’re driven by purpose and ready to bring your best to work that truly matters for patients, we invite you to join us. SMDD is seeking outstanding engineering candidates to work within the process design and development team. The position presents an opportunity to work side by side with chemists, analytical chemists, formulation scientists and other engineers to develop new technical solutions to accelerate our exciting portfolio. Candidates must demonstrate a history of strong technical depth, scientific leadership, and a willingness to promote a collaborative, team-based approach to problem solving.

Responsibilities
  • Apply engineering fundamentals to design and optimize chemical processes for small molecules, oligonucleotides, and synthetic peptides, ensuring robust, scalable processes that reliably supply clinical trial materials.
  • Design and execute lab experiments using knowledge of reaction kinetics, heat/mass transfer, thermodynamics, fluid dynamics, and process modeling to support error-free scale-up.
  • Develop proficiency across a broad range of unit operations - including crystallization, filtration, drying, milling, and batch/continuous chemistry - to assemble complete synthetic manufacturing processes.
  • Serve on integrated commercialization teams to collaboratively develop, test, and oversee process execution from lab scale through manufacturing facilities.
  • Operate with full compliance within a regulated industry, adhering to applicable regulations, guidelines, SOPs, and safety procedures governing drug research and development.
  • Collaborate cross-functionally with analytical, formulation, quality, regulatory, and environmental/safety teams to ensure comprehensive process development and compliance.
  • Oversee scale-up and technology transfer to internal and external manufacturing sites through team meetings, site visits, and ongoing process monitoring.
  • Maintain a continuous learning mindset by engaging with relevant literature, professional organizations, and the broader scientific community through publications and conference presentations.
  • With experience, provide mentorship to junior scientists and engineers while driving documentation and broad sharing of new technologies, methodologies, and process control strategies.
  • Foster an inclusive, collaborative environment that encourages diverse perspectives to deliver innovative solutions to unmet technical challenges.
Education Requirements
  • PhD in Chemical Engineering
  • MSc in Chemical Engineering +7 years of experience in chemical/pharmaceutical process development
  • BSc in Chemical Engineering +10 years of experience in chemical/pharmaceutical process development
Additional Skills And Preferences
  • Experience with design, development, and optimization of synthetic process manufacturing unit operations.
  • Experience with modeling and simulation tools, data analytics and predictive analytics.
  • Experience in batch and continuous unit operations. Experience on technical considerations for equipment design and integration, process monitoring, integration of process analytical technologies (PAT) systems.
  • Excellent oral communication and documentation skills.
  • Demonstrate ability to effectively collaborate with multidisciplinary teams.
  • Demonstrate leadership behaviors with ability to accept challenges, seek opportunities to remove barriers, influence without authority, and lead in areas of uncertainty
  • Demonstrate exemplary teamwork/interpersonal skills
  • Demonstrate problem solving, attention to detail and result oriented behaviors in a fast-paced environment.
Additional Information
  • Travel: 0 to 10%
  • Position Local: Indianapolis, IN LTC- N

Lilly is dedicated to helping individuals with disabilities to actively engage in the workforce, ensuring equal opportunities when vying for positions. If you require accommodation to submit a resume for a position at Lilly, please complete the accommodation request form (https://careers.lilly.com/us/en/workplace-accommodation) for further assistance. Please note this is for individuals to request an accommodation as part of the application process and any other correspondence will not receive a response.

Lilly is proud to be an EEO Employer and does not discriminate on the basis of age, race, color, religion, gender identity, sex, gender expression, sexual orientation, genetic information, ancestry, national origin, protected veteran status, disability, or any other legally protected status.

Our employee resource groups (ERGs) offer strong support networks for their members and are open to all employees. Our current groups include: Africa, Middle East, Central Asia (AMECA), Black Employees at Lilly (BE@Lilly), Chinese Culture Network (CCN), EnAble, Evolve, Lilly Indian Network (LIN), Organization of Latinx at Lilly (OLA), Pride (LGBTQ+ Allies), Veterans Leadership Network (VLN) and Women's Initiative for Leading at Lilly (WILL).

Actual compensation will depend on a candidate’s education, experience, skills, and geographic location. The anticipated wage for this position is

$129,000 - $209,000

Full-time equivalent employees also will be eligible for a company bonus (depending, in part, on company and individual performance).

In addition, Lilly offers a comprehensive benefit program to eligible employees, including eligibility to participate in a company-sponsored 401(k); pension; vacation benefits; eligibility for medical, dental, vision and prescription drug benefits; flexible benefits (e.g., healthcare and/or dependent day care flexible spending accounts); life insurance and death benefits; certain time off and leave of absence benefits; and well-being benefits (e.g., employee assistance program, fitness benefits, and employee clubs and activities).

Lilly reserves the right to amend, modify, or terminate its compensation and benefit programs in its sole discretion and Lilly’s compensation practices and guidelines will apply regarding the details of any promotion or transfer of Lilly employees.

#WeAreLilly

Get your free, confidential resume review.

or drag and drop your file here.

Similar jobs

Similar jobs worth comparing

Advisor – Engineering – Drug Substance
Advisor – Engineering – Drug Substance

100 Eli Lilly and Company • Indianapolis (IN)

On-site
USD 129,000 - 209,000
401(k) eligibility
Pension eligibility
Vacation benefits
+4
Engineer - Drug Substance Synthetic Molecule Design and Development
Engineer - Drug Substance Synthetic Molecule Design and Development

Eli Lilly and Company • Indianapolis (IN)

On-site
USD 66,000 - 172,000
401(k) matching
Pension
Vacation benefits
+1
Director Engineering - Synthetic Molecule Design and Development
Director Engineering - Synthetic Molecule Design and Development

100 Eli Lilly and Company • Indianapolis (IN)

On-site
USD 152,000 - 264,000
401(k) plan
Pension
Health benefits
Engineer - Drug Substance Synthetic Molecule Design and Development
Engineer - Drug Substance Synthetic Molecule Design and Development

100 Eli Lilly and Company • Indianapolis (IN)

On-site
USD 66,000 - 172,000
Director, Drug Product - SMDD
Director, Drug Product - SMDD

Eli Lilly and Company • Indianapolis (IN)

On-site
USD 149,000 - 218,000
Director Engineering - Synthetic Molecule Design and Development
Director Engineering - Synthetic Molecule Design and Development

Eli Lilly and Company • Indianapolis (IN)

On-site
USD 151,500 - 264,000
Company bonus
401(k) matching
Pension
+5
Sr. Director, Process Chemistry
Sr. Director, Process Chemistry

BioSpace • Indianapolis (IN)

On-site
USD 139,500 - 246,400
401(k) and pension plans
Vacation benefits
Comprehensive medical, dental, and vision benefits
+1
Director Early Phase Process Chemistry SMDD
Director Early Phase Process Chemistry SMDD

100 Eli Lilly and Company • Indianapolis (IN)

On-site
USD 149,000 - 257,000
401(k) plan
Vacation benefits
Medical, dental, vision insurance
+1
Director Early Phase Process Chemistry SMDD
Director Early Phase Process Chemistry SMDD

Eli Lilly and Company • Indianapolis (IN)

On-site
USD 149,000 - 257,000
Company bonus eligibility
Sr. Engineer - Process (Small Molecules)
Sr. Engineer - Process (Small Molecules)

Lilly Group • Houston (TX)

On-site
USD 68,000 - 174,000
401(k) plan
Vacation benefits
Bonus program