Scientist (Biomedical Image Analysis Scientist)

Aganitha Cognitive Solutions; Hyderabad; On-site; INR 1,800,000 - 2,400,000; Full time

Job summary

Aganitha Cognitive Solutions in Hyderabad is seeking a Customer Solutions Manager to blend omics, structural biology and AI to accelerate discovery and development of therapeutics. You will work with global biopharma customers, identify their needs, and build cross-disciplinary imaging solutions with internal teams.

Responsibilities include designing deep learning pipelines for biomedical image analysis, collaborating with scientists, and ensuring reproducible results while staying current with

Qualifications

• Strong background in Biomedical Engineering, Computer Science, Electrical Engineering, Biophysics, Computational Biology, or related field.
• PhD or Master’s degree with experience in biomedical image analysis or computer vision.
• Hands-on experience with Python, PyTorch (or TensorFlow), OpenCV, and scikit-image.

Responsibilities

• Design, implement, and optimize algorithms for biomedical image analysis using deep learning and computer vision techniques (CNNs, transformers, diffusion models, etc.).
• Work on multi-modal datasets — including cellular images, microscopy, MRI, CT, EEG, ECG and histopathology slides — to extract meaningful biological or clinical insights.
• Develop automated image & waveform segmentation, classification, and feature extraction workflows.
• Collaborate with biologists, chemists, and AI engineers to integrate imaging data with omics and molecular datasets.
• Contribute to building scalable pipelines for image data preprocessing, model training, and deployment.
• Validate models against experimental data and ensure reproducibility of results.
• Stay current with advances in biomedical imaging, AI/ML architectures, and data integration methods.

Skills

Biomedical Engineering

Computer Science

Electrical Engineering

Biophysics

Computational Biology

Education

PhD or Master’s degree in a relevant field

Tools

Python

PyTorch

OpenCV

scikit-image

Job description

Join us and contribute to the discovery of medicines that will impact lives!

High-throughput experimentation, Computational & Data-driven modeling and the dawn of the Open Science era are dramatically changing how BioPharma researches, discovers and develops new therapeutics. Aganitha is co-innovating with global biopharma customers on next generation R&D.

As a Customer Solutions Manager at Aganitha, you will be called upon to blend advances in multiple disciplines such as Omics, Structural Biology, Protein and Antibody Engineering, Computational Quantum Chemistry, AI/ML, and High-performance computing in the Cloud to help our global BioPharma customers accelerate design and development of SMOL, Antibody, Gene, Cell & RNA therapeutics. You will work with research leaders at our customer organizations, identify their needs and build solutions in collaboration with our internal technical and scientific teams.

To succeed in this role, you must have a strong interest in engaging with customers to apply the latest scientific and technology advances for R&D acceleration, driving revenue growth for Aganitha in the process.

Aganitha (अगणित): “countless” or “limitless” in Sanskrit serves as a reminder and inspiration about the limitless potential in each one of us. Come join us to bring out your best and be limitless!

Key Responsibilities

• Design, implement, and optimize algorithms for biomedical image analysis using deep learning and computer vision techniques (CNNs, transformers, diffusion models, etc.).
• Work on multi-modal datasets — including cellular images, microscopy, MRI, CT, EEG, ECG and histopathology slides — to extract meaningful biological or clinical insights.
• Develop automated image & waveform segmentation, classification, and feature extraction workflows.
• Collaborate with biologists, chemists, and AI engineers to integrate imaging data with omics and molecular datasets.
• Contribute to building scalable pipelines for image data preprocessing, model training, and deployment.
• Validate models against experimental data and ensure reproducibility of results.
• Stay current with advances in biomedical imaging, AI/ML architectures, and data integration methods.

Desired Skills / Expertise

• Strong background in Biomedical Engineering , Computer Science , Electrical Engineering , Biophysics , Computational Biology , or related field.
• PhD or Master’s degree with experience in biomedical image analysis or computer vision.
• Hands-on experience with Python , PyTorch (or TensorFlow), OpenCV , and scikit-image .
• Experience with microscopy, histopathology, and radiology image datasets.
• Knowledge of image preprocessing, segmentation, and 3D/volumetric data handling.
• Familiarity with data annotation , weak supervision , or multi-modal learning is a plus.
• Excellent communication and problem-solving skills.

Preferred Qualifications

• Prior experience integrating image data with omics, clinical, or molecular datasets.
• Experience deploying ML models or using MLOps tools (e.g., MLFlow, ClearML).
• Publications or open-source contributions in biomedical imaging or computational biology.