Bioinformatics Scientist

Basecamp Research; Greater London; On-site; GBP 60,000 - 95,000; Full time

Benefits offered by this job

Competitive salary

Flexible working options

Private healthcare

Generous equity

Job summary

Basecamp Research in London is seeking a Bioinformatics Scientist to join the Genomics team. You will turn vast, heterogeneous biological data into annotated, trustworthy resources for model development.

We are building the Trillion Gene Atlas and other large-scale datasets, requiring you to develop methods that label and mine biology never before characterized, ensuring data is machine-readable and model-ready for downstream AI applications.

Qualifications

• PhD preferred in a relevant life sciences field.
• Experience curating large biological datasets for model training.
• Ability to build or adapt tools when existing ones fail.

Responsibilities

• Analyse diverse biological data to produce model-ready datasets.
• Develop methods to label and mine complex data.
• Design schemas for non-standard biology data and benchmark improvements.
• Prototype methods and validate on real, messy data at scale.
• Integrate newer ML methods where beneficial and ensure data provenance.

Skills

Sequence informatics

Data curation

ML/modeling

Engineering mindset

Education

PhD in a relevant field

MSc with 1-3 years of experience

BSc with 3+ years

Tools

Dagster

Nextflow

Bioinformatics tools

Job description

About Us

Basecamp Research is dedicated to solving major challenges in the life sciences by exploring Beyond Known Biology. Our teams build frontier AI models using BaseData, the world's largest ethically-sourced and globally representative biological dataset. Our Global Research Team collects and curates our own biological data through partnerships with more than 152 organisations in 28 countries, giving its AI access to genetic diversity that doesn't exist for models trained on public database sources. This enables Basecamp Research to design novel protein sequences and biological systems that can accelerate therapeutic research and development.

In October 2024 we closed Series B and in January 2026 finalised pre-Series C investment from NVIDIA. With hubs both in London, UK as well as Boston, Massachusetts, USA and partners with biopharma companies and academic institutions worldwide, our work has been recognised with honours including Fast Company\'s Top 10 Most Innovative Companies in Biotech and the FT-backed Sifted AI100 list of Europe\'s leading AI startups.

At Basecamp Research, we pride ourselves on being a diverse, exciting, fun, and flexible place to work. Our team of biologists, engineers, ML scientists, field explorers, and operations specialists are united by a sense of adventure and the belief that nature has already designed the solutions to our planet\'s greatest challenges - we just need to go out and discover them! If you feel passionate about the power of biology, data, and AI to build a better world, we\'d love to hear from you.

The Role

We are looking for a Bioinformatics Scientist to join our Genomics team in London. You will turn vast, heterogeneous, often downright strange biological data into annotated, trustworthy resources the rest of the company and our models can build on.

We are building biological datasets at a scale no reference database has approached. Our flagship effort, the Trillion Gene Atlas, is one of the largest long-read sequencing efforts to date, targeting a trillion genes and a quadrillion assembled nucleotides.

The heart of this role is understanding the data itself. Much of what we collect doesn\'t fit existing schemas or tools, so the job is not to just run a standard toolchain but to develop new methods that label and mine biology no one has characterised before. Because you understand both the biology and what the models need downstream, you know what the data has to become, not just correct but machine-readable and model-ready.

What you\'ll do

• Analyse diverse, messy biological datatypes, primarily microbiomes from a wide range of sample types, spanning both prokaryotes and eukaryotes, bringing the biological judgment to know when an annotation is a real signal versus an artefact.
• Develop new methods and tools to label and mine this data.
• Design approaches for biology that doesn\'t fit standard schemas, curate the data to be model-ready, and benchmark honestly to tell real improvement from noise.
• Prototype methods and validate on real, messy data at scale. Own light orchestration to prove or disprove an approach, then hand off to dedicated teams who take it to full production scale.
• Reach for newer ML methods where they are the right tool for annotation, labelling, or mining, and fold them into your approach cleanly.
• Keep the data trustworthy. Provenance, edge cases, and data integrity are part of the craft, not an afterthought.
• Help build outward-facing tools where the opportunity arises. For example, a predictive "oracle" that helps our field teams target regions of the planet where undiscovered biodiversity is most likely to be found, turning curated data back into smarter sampling and discovery.

About You

• You have a deep understanding of biological data and a strong core in sequence informatics (alignment, annotation, sequence analysis), with the judgment to know when standard tools are misleading or not right for the job. When a tool or method doesn\'t exist, your instinct is to build one - and the tools and methods you\'ve built have been applied to real data at scale.
• You\'ve curated data that went on to train real models or feed large-scale analyses. You\'re a capable enough engineer to make your methods real, but you treat engineering as the means, not the mission.
• You like to move fast, to ship, learn, and iterate at pace, without cutting corners on rigour.
• You are excited by the scale of the biology: genetic diversity that exists in no public database, and the chance to invent the methods that make it usable for the first time.
• You'll likely have a PhD in a relevant field, an MSc with 1-3 years of relevant experience, or a BSc with 3 or more.
• Low ego, collaborative instincts, and a startup mentality. You\'re comfortable with ambiguity and happy to wear multiple hats in a team where everyone contributes towards the company\'s success.

Nice to Have

• Experience building or fine-tuning ML models.
• Experience building production components and integrating with a workflow orchestrator such as Dagster or Nextflow.
• Experience with microbiomes, and especially with trickier components like viruses/phage or lower eukaryotes.
• Experience authoring or contributing to widely used bioinformatics tools.
• Experience with compiled programming languages (e.g. C++, Rust, Golang).

What we offer in return

• Impactful Mission: This is a rare chance to do work that genuinely matters. You\'ll join a talented, fast-moving team, access unique biological datasets at scale, and see your contributions shape real breakthroughs in AI and curative therapeutics.
• Collaborative Culture: You\'ll be surrounded by world-class engineers, scientists, and researchers who care deeply about their work and about each other. With offices in London and Boston, we\'ve built a flexible, cross-functional environment where personal development and real ownership aren\'t just talking points.
• High Growth: We truly believe in investing in our people. We make coaching available to team members during steep growth journeys and we have twice-yearly promotion opportunities. People who are really successful here own it and go directly to solve problems at pace, and we ensure reward increases with impact.
• Comprehensive Benefits: We\'ve built a benefits package people value. That means competitive salary, equity, and private healthcare with no medical history exclusions - so strong that most employees\' family members opt into our plan over their own. We also offer Carrot Fertility with IVF stipend, salary sacrifice pension, bike-to-work scheme, life insurance, and more.