PhD student – Molecular microbiology of bacterial biofilms

Myjob; Basel; On-site; CHF 48,000 - 60,000; Full time

Job summary

The Biozentrum of the University of Basel invites applications for a PhD student in molecular microbiology focused on bacterial biofilms. The position starts immediately or by mutual agreement and is fully funded through the PhD program and Swiss NCCR AntiResist collaboration.

Candidates should hold a Master's degree with a research thesis in molecular microbiology and demonstrate strong motivation for multidisciplinary, collaborative work in an international environment located in Basel.

Qualifications

• Master's degree with a research thesis in molecular microbiology.

Skills

Molecular biology

Microbiology

Transcriptomics

Genetics

Confocal microscopy

Education

Master's degree in molecular microbiology

Tools

Transcriptomics

Genetics

Confocal microscopy

Job description

PhD student – Molecular microbiology of bacterial biofilms

Starting immediately or as per agreement

The Biozentrum of the University of Basel is one of the world's leading life sciences institutes. With 33 research groups and 500 employees, we are a dynamic and international research community that has spawned many fundamental discoveries in biology and medicine as well as several Nobel laureates. Join our community!

The research group of Prof. Knut Drescher at the Biozentrum of the University of Basel seeks to appoint a PhD student in molecular microbiology, with a focus on bacterial biofilms. The position is available immediately or by mutual agreement.

The project

The research group of Knut Drescher (https://drescherlab.org) focuses on understanding the development and emergent properties of bacterial communities (called biofilms). Biofilms are antibiotic-tolerant bacterial communities that are the cause of many chronic and acute infections in humans, but biofilms are also a model system for understanding basic aspects of multicellular organization in living systems. Our projects utilize highly controlled laboratory experiments based on microfluidic growth systems for biofilms, and stem-cell-derived organoids and bioengineered tissues for infections. We recently made important discoveries about danger signals that trigger biofilm formation (Nature Microbiology 2025) and emergent behaviours of biofilms (Cell 2023) that are the basis for the PhD project.

The PhD project will investigate new emergent behaviours of biofilm communities that do not occur in isolated bacterial cells. The project will utilize a variety of molecular tools to analyze, manipulate, and perturb biofilms. A particular focus will be on the use of transcriptomics, genetics, and confocal microscopy methods for investigating cellular behaviours in biofilms during biofilm growth and during infections. The exact project is flexible and will be developed together with Knut Drescher, depending on the strengths and interests of the PhD student.

To get an overview of our lab's recent projects, take a look at our publications: https://drescherlab.org/publications.html

Your profile

We are looking for a highly motivated and talented PhD student to join our lab. Required qualification: A Master's degree with a research thesis in molecular microbiology.

We offer you

We offer a fully funded PhD position in a highly interactive, multidisciplinary, and international research group at the Biozentrum. Our group brings together expertise in molecular microbiology, biophysics, as well as bioinformatics and the analysis of large datasets. Additionally, the PhD student will be part of the Swiss NCCR AntiResist consortium, with lots of opportunities for scientific exchange with colleagues in related fields. Moreover, the Biozentrum offers excellent support from various core facilities with expert staff, and a structured PhD program. Our group embraces diversity and equal opportunity. We are committed to building a team that represents a variety of backgrounds, perspectives, and skills.

Basel is an international city with people from over 150 countries, located on the border where Switzerland, Germany, and France meet. Basel is home to numerous biomedical research institutions, offering outstanding opportunities for training, networking, and career development. Basel provides a high standard of living and a rich and varied cultural atmosphere.