Bioinformatician (AusTrakka)

University-of-Melbourne; Melbourne; On-site; AUD 111,000 - 120,000; Full time

Benefits offered by this job

17% superannuation

Salary packaging

Professional development opportunities

Health and wellbeing programs

Discounted services

Job summary

The University of Melbourne invites applications for a full-time, fixed-term Bioinformatician (AusTrakka) within the Department of Microbiology and Immunology, School of Biomedical Sciences. You will apply advanced bioinformatics to national pathogen genomics surveillance, analyze genomic data, and refine pipelines to enhance Australia’s public health response.

You will collaborate with genomic epidemiologists and partners across government, laboratories and academia, designing pipelines,

Qualifications

• Postgraduate qualification in Bioinformatics, Computational Biology or closely related discipline.
• Experience using Python and/or R in UNIX/Linux environments.
• Ability to design, validate and troubleshoot bioinformatics pipelines for pathogen genomics.
• Experience with large NGS datasets and phylogenomics in public health/clinical contexts.

Responsibilities

• Plan, execute and report AusTrakka genomic analyses to support surveillance and outbreak investigations.
• Collaborate with epidemiologists and public health partners to interpret findings and communicate actionable reports.
• Design, validate and maintain bioinformatics pipelines for routine pathogen genomics service delivery.
• Represent AusTrakka and MDU PHL bioinformatics in internal and external forums.

Skills

Python

R

UNIX/Linux

Bioinformatics pipelines

Phylogenomics

Data interpretation

Report writing

Education

Postgraduate qualification in Bioinformatics/Computational Biology

Tools

Python

R

UNIX/Linux

Docker/Containers

Workflow engines

Job description

Role type: Full-time; Fixed-term (12 months)Faculty: Medicine, Dentistry and Health SciencesDepartment/ School: Department of Microbiology and Immunology, School of Biomedical SciencesSalary: $111,275 – $120,435 p.a plus 17% superNationally significant pathogen genomics role / Drive real-time outbreak detection and response / Build connections across Australia’s public health genomics communityApply your bioinformatics expertise to AusTrakka and help shape Australia’s future public health surveillance capabilityInvesting in you – 17% superannuation, benefits package including salary packaging, health and wellbeing programs, discounted services, and professional development opportunities.The University of MelbourneWe take pride in our people, who all contribute to our mission to benefit society through the transformative impact of education and research. Discover more via our website.Your next career opportunityYou will apply advanced bioinformatics skills to national pathogen genomics surveillance through AusTrakka, directly informing outbreak detection and public health responses. Working with leading experts across jurisdictions, you will analyse and interpret genomic data, refine pipelines, and support continuous improvement of Australia’s genomics capability. You will gain deep exposure to the full public health genomics ecosystem, building relationships with key partners across government, laboratories and academia.What you will deliver:Plan, execute and report routine and ad hoc AusTrakka genomic analyses that support surveillance and outbreak investigationsCollaborate with genomic epidemiologists and public health partners to interpret findings and communicate clear, actionable reportsDesign, develop, validate and maintain bioinformatics pipelines and workflows for routine pathogen genomics service deliveryMaintain high standards for data management, documentation, turnaround times and audit-ready practice across analyses and pipelinesRepresent AusTrakka and MDU PHL bioinformatics capabilities in internal and external forums, including meetings and conferencesYou may be a great fit if you:Hold a postgraduate qualification in Bioinformatics, Computational Biology or a closely related disciplineUse Python and/or R confidently and work effectively in a UNIX or Linux environmentDesign, validate and troubleshoot bioinformatics pipelines using standard tools for assembly, gene detection and phylogeneticsWork with large next-generation sequencing datasets, including phylogenomics, ideally in a public health or clinical contextManage competing priorities and high-throughput analyses while maintaining accuracy, documentation quality and required turnaround timesBring experience or interest in workflow engines, containers, and advanced statistical or microbial genomics approachesFor further information please refer to the attached PD.What we offer you!We offer the opportunity to be part of a vibrant community and enjoy a comprehensive range of benefits to support your success and sense of fulfilment, including:Build future financial security with 17% superannuationSupportive flexible work arrangements underpinned by our commitment to inclusion and well-beingCareer development opportunities, including access to a range of tailored programs, such as Academic Women in Leadership, and learning platforms including LinkedIn LearningProgressive, considerate leave provisions to empower your work-life balance and well-being, including leading parental leave, gender affirmation leave, cultural leave, and menstruation and menopause leave.Salary packaging and access to a range of discounted services including Bupa health insurance, and access to unique cultural and recreational benefits such as discounts for the Melbourne Theatre CompanyHealth and well-being services including a leading Employee Assistance ProgramYour new teamYou will join the Microbiological Diagnostic Unit Public Health Laboratory within the Department of Microbiology and Immunology, part of the School of Biomedical Sciences in the Faculty of Medicine, Dentistry and Health Sciences. Embedded in the Peter Doherty Institute, the team integrates laboratory science, genomics, epidemiology and bioinformatics to tackle diseases of public health importance. You will collaborate with Victorian, national and international partners in a values-driven environment that prizes excellence, integrity, inclusivity and real-world impact.Be YourselfThe University of Melbourne is an Equal Opportunity Employer and a child-safe organisation. The diversity of our community enriches us all, and we are committed to creating an inclusive and fair workplace where everyone is valued, respected, and empowered to succeed. We welcome applicants from all backgrounds, identities, and experiences. Discover more about Diversity and Inclusion at UniMelb.We're committed to a barrier-free recruitment process and ongoing workplace support, providing adjustments throughout. We warmly encourage applications from people with disabilities. Learn more about how we support an accessible recruitment process.Aboriginal and Torres Strait Islander ApplicantsWe aspire to be the University of choice for Indigenous Australians. Visit our Indigenous staff page to learn more about our investment and support for Aboriginal and Torres Strait Islander staff.Indigenous applicants are encouraged to connect with our Indigenous Employment & Development team at [e-mail] .Application essentials:Visit \"apply with us\" to learn more about the process, including tips and FAQs.You must have current valid work rights for Australia. Visa sponsorship is not available for this role.A Working with Children Check is required for all positions. If successful, we will guide you through the process and reimburse you.Please upload your resume and a cover letter outlining your interest and experience as part of the application process.Please upload your responses to the Selection Criteria, found in the . Learn more about responding to Selection CriteriaWant to know more?For queries related to this specific position, contact Jake Lacey at [e-mail] questions related to our recruitment process email Tara at [e-mail] recruitment adjustments contact Kim Groizard on [phone] or at [e-mail] (subject: 'Recruitment Adjustments').Apply today, and join a community that’s shaping the future.Applications close:22 November 2026 11:55 PM; Melbourne time zone.:JR-019676 Bioinformatician (AusTrakka) -PD.docxJR-019676 Bioinformatician (AusTrakka) -PD.pdf